Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ssr1Q9CY50 Rncr4-201ENSMUST00000194541 2234 ntBASIC20.17■□□□□ 0.82
Ssr1Q9CY50 Gm43231-201ENSMUST00000202960 2258 ntBASIC20.16■□□□□ 0.82
Ssr1Q9CY50 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Ssr1Q9CY50 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ssr1Q9CY50 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Ssr1Q9CY50 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ssr1Q9CY50 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC20.16■□□□□ 0.82
Ssr1Q9CY50 Gm8493-201ENSMUST00000196881 489 ntBASIC20.16■□□□□ 0.82
Ssr1Q9CY50 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC20.16■□□□□ 0.82
Ssr1Q9CY50 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Ssr1Q9CY50 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Ssr1Q9CY50 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ssr1Q9CY50 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ssr1Q9CY50 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
Ssr1Q9CY50 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC20.16■□□□□ 0.82
Ssr1Q9CY50 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Ssr1Q9CY50 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Ssr1Q9CY50 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ssr1Q9CY50 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ssr1Q9CY50 AC124603.1-201ENSMUST00000223843 308 ntBASIC20.15■□□□□ 0.82
Ssr1Q9CY50 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Ssr1Q9CY50 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ssr1Q9CY50 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Ssr1Q9CY50 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Ssr1Q9CY50 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC20.15■□□□□ 0.82
Ssr1Q9CY50 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
Ssr1Q9CY50 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Ssr1Q9CY50 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Ssr1Q9CY50 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Ssr1Q9CY50 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC20.14■□□□□ 0.81
Ssr1Q9CY50 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ssr1Q9CY50 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ssr1Q9CY50 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ssr1Q9CY50 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Ssr1Q9CY50 Gm11421-201ENSMUST00000122124 294 ntBASIC20.14■□□□□ 0.81
Ssr1Q9CY50 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Ssr1Q9CY50 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC20.14■□□□□ 0.81
Ssr1Q9CY50 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ssr1Q9CY50 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ssr1Q9CY50 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ssr1Q9CY50 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ssr1Q9CY50 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Ssr1Q9CY50 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ssr1Q9CY50 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
Ssr1Q9CY50 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ssr1Q9CY50 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ssr1Q9CY50 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ssr1Q9CY50 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ssr1Q9CY50 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ssr1Q9CY50 Gm12821-201ENSMUST00000120022 600 ntBASIC20.13■□□□□ 0.81
Ssr1Q9CY50 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC20.13■□□□□ 0.81
Ssr1Q9CY50 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
Ssr1Q9CY50 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ssr1Q9CY50 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ssr1Q9CY50 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ssr1Q9CY50 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
Ssr1Q9CY50 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ssr1Q9CY50 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ssr1Q9CY50 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ssr1Q9CY50 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Ssr1Q9CY50 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Ssr1Q9CY50 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Ssr1Q9CY50 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC20.12■□□□□ 0.81
Ssr1Q9CY50 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC20.12■□□□□ 0.81
Ssr1Q9CY50 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ssr1Q9CY50 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ssr1Q9CY50 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
Ssr1Q9CY50 Appbp2os-202ENSMUST00000206972 447 ntBASIC20.12■□□□□ 0.81
Ssr1Q9CY50 AC137127.1-201ENSMUST00000213466 1078 ntBASIC20.12■□□□□ 0.81
Ssr1Q9CY50 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Ssr1Q9CY50 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ssr1Q9CY50 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ssr1Q9CY50 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ssr1Q9CY50 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ssr1Q9CY50 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ssr1Q9CY50 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ssr1Q9CY50 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Ssr1Q9CY50 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ssr1Q9CY50 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Ssr1Q9CY50 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ssr1Q9CY50 Smad6-203ENSMUST00000179458 273 ntBASIC20.11■□□□□ 0.81
Ssr1Q9CY50 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC20.11■□□□□ 0.81
Ssr1Q9CY50 Wdr70-203ENSMUST00000227371 1130 ntBASIC20.11■□□□□ 0.81
Ssr1Q9CY50 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Ssr1Q9CY50 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ssr1Q9CY50 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Ssr1Q9CY50 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ssr1Q9CY50 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Ssr1Q9CY50 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ssr1Q9CY50 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ssr1Q9CY50 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ssr1Q9CY50 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ssr1Q9CY50 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ssr1Q9CY50 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC20.1■□□□□ 0.81
Ssr1Q9CY50 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ssr1Q9CY50 Gm27454-201ENSMUST00000185090 204 ntBASIC20.1■□□□□ 0.81
Ssr1Q9CY50 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ssr1Q9CY50 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Ssr1Q9CY50 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms