Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 AC008764.7-201ENST00000593779 1081 ntBASIC19.49■□□□□ 0.71
TRIM2Q9C040 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.49■□□□□ 0.71
TRIM2Q9C040 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.49■□□□□ 0.71
TRIM2Q9C040 AL137060.1-201ENST00000618151 2648 ntBASIC19.49■□□□□ 0.71
TRIM2Q9C040 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
TRIM2Q9C040 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM2Q9C040 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.48■□□□□ 0.71
TRIM2Q9C040 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.48■□□□□ 0.71
TRIM2Q9C040 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM2Q9C040 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM2Q9C040 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM2Q9C040 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM2Q9C040 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM2Q9C040 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
TRIM2Q9C040 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM2Q9C040 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM2Q9C040 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.48■□□□□ 0.71
TRIM2Q9C040 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM2Q9C040 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM2Q9C040 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
TRIM2Q9C040 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM2Q9C040 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.47■□□□□ 0.71
TRIM2Q9C040 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM2Q9C040 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM2Q9C040 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.47■□□□□ 0.71
TRIM2Q9C040 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM2Q9C040 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM2Q9C040 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM2Q9C040 AC091305.1-201ENST00000479476 895 ntBASIC19.47■□□□□ 0.71
TRIM2Q9C040 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC19.47■□□□□ 0.71
TRIM2Q9C040 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC19.47■□□□□ 0.71
TRIM2Q9C040 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.47■□□□□ 0.71
TRIM2Q9C040 AC027682.1-201ENST00000562846 899 ntBASIC19.47■□□□□ 0.71
TRIM2Q9C040 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC19.47■□□□□ 0.71
TRIM2Q9C040 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM2Q9C040 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
TRIM2Q9C040 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.47■□□□□ 0.71
TRIM2Q9C040 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
TRIM2Q9C040 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM2Q9C040 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM2Q9C040 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM2Q9C040 AP006587.3-201ENST00000525742 1516 ntBASIC19.46■□□□□ 0.71
TRIM2Q9C040 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
TRIM2Q9C040 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM2Q9C040 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM2Q9C040 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM2Q9C040 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.46■□□□□ 0.71
TRIM2Q9C040 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC19.46■□□□□ 0.71
TRIM2Q9C040 AC105265.2-201ENST00000467189 838 ntBASIC19.46■□□□□ 0.71
TRIM2Q9C040 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.46■□□□□ 0.71
TRIM2Q9C040 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
TRIM2Q9C040 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM2Q9C040 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM2Q9C040 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
TRIM2Q9C040 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM2Q9C040 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM2Q9C040 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.45■□□□□ 0.7
TRIM2Q9C040 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.45■□□□□ 0.7
TRIM2Q9C040 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.45■□□□□ 0.7
TRIM2Q9C040 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.45■□□□□ 0.7
TRIM2Q9C040 AC003102.1-202ENST00000563394 1796 ntBASIC19.45■□□□□ 0.7
TRIM2Q9C040 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.45■□□□□ 0.7
TRIM2Q9C040 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM2Q9C040 AC099791.1-201ENST00000416440 715 ntBASIC19.45■□□□□ 0.7
TRIM2Q9C040 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
TRIM2Q9C040 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM2Q9C040 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM2Q9C040 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM2Q9C040 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM2Q9C040 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
TRIM2Q9C040 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.44■□□□□ 0.7
TRIM2Q9C040 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.44■□□□□ 0.7
TRIM2Q9C040 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM2Q9C040 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM2Q9C040 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
TRIM2Q9C040 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM2Q9C040 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM2Q9C040 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.44■□□□□ 0.7
TRIM2Q9C040 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.44■□□□□ 0.7
TRIM2Q9C040 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
TRIM2Q9C040 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM2Q9C040 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
TRIM2Q9C040 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.44■□□□□ 0.7
TRIM2Q9C040 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
TRIM2Q9C040 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM2Q9C040 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
TRIM2Q9C040 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.43■□□□□ 0.7
TRIM2Q9C040 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM2Q9C040 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.43■□□□□ 0.7
TRIM2Q9C040 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.43■□□□□ 0.7
TRIM2Q9C040 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19.43■□□□□ 0.7
TRIM2Q9C040 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
TRIM2Q9C040 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
TRIM2Q9C040 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM2Q9C040 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.43■□□□□ 0.7
TRIM2Q9C040 RASA4CP-201ENST00000424092 1398 ntBASIC19.43■□□□□ 0.7
TRIM2Q9C040 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.42■□□□□ 0.7
TRIM2Q9C040 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.42■□□□□ 0.7
TRIM2Q9C040 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
TRIM2Q9C040 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms