Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 AC139795.3-201ENST00000606358 541 ntBASIC13□□□□□ -0.33
KRTAP3-3Q9BYR6 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
KRTAP3-3Q9BYR6 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC12.99□□□□□ -0.33
KRTAP3-3Q9BYR6 ACAT1-202ENST00000299355 1345 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
KRTAP3-3Q9BYR6 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
KRTAP3-3Q9BYR6 AC023590.1-202ENST00000366457 781 ntTSL 3 BASIC12.99□□□□□ -0.33
KRTAP3-3Q9BYR6 COX20P1-201ENST00000366529 357 ntBASIC12.99□□□□□ -0.33
KRTAP3-3Q9BYR6 TMED5-201ENST00000370280 750 ntTSL 2 BASIC12.99□□□□□ -0.33
KRTAP3-3Q9BYR6 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC12.99□□□□□ -0.33
KRTAP3-3Q9BYR6 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
KRTAP3-3Q9BYR6 AC226101.1-201ENST00000401483 387 ntBASIC12.99□□□□□ -0.33
KRTAP3-3Q9BYR6 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC12.99□□□□□ -0.33
KRTAP3-3Q9BYR6 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
KRTAP3-3Q9BYR6 P2RY10P2-201ENST00000416730 913 ntBASIC12.99□□□□□ -0.33
KRTAP3-3Q9BYR6 MTCO2P1-201ENST00000424648 477 ntBASIC12.99□□□□□ -0.33
KRTAP3-3Q9BYR6 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
KRTAP3-3Q9BYR6 NFU1-207ENST00000462320 558 ntTSL 4 BASIC12.99□□□□□ -0.33
KRTAP3-3Q9BYR6 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC12.99□□□□□ -0.33
KRTAP3-3Q9BYR6 AC055758.2-201ENST00000495382 799 ntTSL 2 BASIC12.99□□□□□ -0.33
KRTAP3-3Q9BYR6 MTCYBP20-201ENST00000524239 1129 ntBASIC12.99□□□□□ -0.33
KRTAP3-3Q9BYR6 OR4R3P-201ENST00000525084 838 ntBASIC12.99□□□□□ -0.33
KRTAP3-3Q9BYR6 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC12.99□□□□□ -0.33
KRTAP3-3Q9BYR6 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC12.99□□□□□ -0.33
KRTAP3-3Q9BYR6 AC108097.1-201ENST00000568275 534 ntTSL 4 BASIC12.99□□□□□ -0.33
KRTAP3-3Q9BYR6 AL358072.1-201ENST00000604156 575 ntBASIC12.99□□□□□ -0.33
KRTAP3-3Q9BYR6 Z99289.3-201ENST00000605586 594 ntBASIC12.99□□□□□ -0.33
KRTAP3-3Q9BYR6 GNG2-216ENST00000615906 1294 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
KRTAP3-3Q9BYR6 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
KRTAP3-3Q9BYR6 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC12.99□□□□□ -0.33
KRTAP3-3Q9BYR6 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
KRTAP3-3Q9BYR6 AL358913.2-201ENST00000553881 1548 ntBASIC12.98□□□□□ -0.33
KRTAP3-3Q9BYR6 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
KRTAP3-3Q9BYR6 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC12.98□□□□□ -0.33
KRTAP3-3Q9BYR6 WRB-202ENST00000380708 1464 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
KRTAP3-3Q9BYR6 RSRC1-202ENST00000312179 1443 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
KRTAP3-3Q9BYR6 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
KRTAP3-3Q9BYR6 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
KRTAP3-3Q9BYR6 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
KRTAP3-3Q9BYR6 FGL1-201ENST00000381840 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
KRTAP3-3Q9BYR6 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
KRTAP3-3Q9BYR6 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC12.98□□□□□ -0.33
KRTAP3-3Q9BYR6 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
KRTAP3-3Q9BYR6 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
KRTAP3-3Q9BYR6 RNU6-584P-201ENST00000410350 95 ntBASIC12.98□□□□□ -0.33
KRTAP3-3Q9BYR6 AC092474.1-201ENST00000416158 1167 ntBASIC12.98□□□□□ -0.33
KRTAP3-3Q9BYR6 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC12.98□□□□□ -0.33
KRTAP3-3Q9BYR6 AC159540.1-201ENST00000422600 555 ntTSL 4 BASIC12.98□□□□□ -0.33
KRTAP3-3Q9BYR6 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC12.98□□□□□ -0.33
KRTAP3-3Q9BYR6 AL500527.1-201ENST00000448532 255 ntBASIC12.98□□□□□ -0.33
KRTAP3-3Q9BYR6 AC006042.1-201ENST00000449931 524 ntTSL 4 BASIC12.98□□□□□ -0.33
KRTAP3-3Q9BYR6 ZNF277-206ENST00000450657 1075 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
KRTAP3-3Q9BYR6 USP9YP25-201ENST00000457708 443 ntBASIC12.98□□□□□ -0.33
KRTAP3-3Q9BYR6 RPL37AP8-201ENST00000494116 276 ntBASIC12.98□□□□□ -0.33
KRTAP3-3Q9BYR6 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC12.98□□□□□ -0.33
KRTAP3-3Q9BYR6 LINC01099-202ENST00000512527 578 ntTSL 2 BASIC12.98□□□□□ -0.33
KRTAP3-3Q9BYR6 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
KRTAP3-3Q9BYR6 AP003097.1-201ENST00000530657 1135 ntBASIC12.98□□□□□ -0.33
KRTAP3-3Q9BYR6 NOVA1-AS1-201ENST00000547786 818 ntTSL 3 BASIC12.98□□□□□ -0.33
KRTAP3-3Q9BYR6 MTND2P17-201ENST00000550281 688 ntBASIC12.98□□□□□ -0.33
KRTAP3-3Q9BYR6 EEF1B2P4-201ENST00000551398 348 ntBASIC12.98□□□□□ -0.33
KRTAP3-3Q9BYR6 AL442163.2-201ENST00000553912 710 ntBASIC12.98□□□□□ -0.33
KRTAP3-3Q9BYR6 AC103982.1-201ENST00000561358 571 ntTSL 4 BASIC12.98□□□□□ -0.33
KRTAP3-3Q9BYR6 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC12.98□□□□□ -0.33
KRTAP3-3Q9BYR6 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC12.98□□□□□ -0.33
KRTAP3-3Q9BYR6 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC12.98□□□□□ -0.33
KRTAP3-3Q9BYR6 ZNF714-203ENST00000596053 800 ntTSL 2 BASIC12.98□□□□□ -0.33
KRTAP3-3Q9BYR6 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC12.98□□□□□ -0.33
KRTAP3-3Q9BYR6 AC009812.1-201ENST00000605948 1059 ntBASIC12.98□□□□□ -0.33
KRTAP3-3Q9BYR6 AP001330.5-201ENST00000607176 411 ntBASIC12.98□□□□□ -0.33
KRTAP3-3Q9BYR6 AC068787.1-201ENST00000623908 691 ntBASIC12.98□□□□□ -0.33
KRTAP3-3Q9BYR6 AC090582.1-201ENST00000636321 199 ntBASIC12.98□□□□□ -0.33
KRTAP3-3Q9BYR6 RPL31P11-201ENST00000426558 1558 ntBASIC12.98□□□□□ -0.33
KRTAP3-3Q9BYR6 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
KRTAP3-3Q9BYR6 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
KRTAP3-3Q9BYR6 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
KRTAP3-3Q9BYR6 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
KRTAP3-3Q9BYR6 SNCA-202ENST00000345009 1096 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
KRTAP3-3Q9BYR6 GNAS-209ENST00000371081 730 ntTSL 2 BASIC12.97□□□□□ -0.33
KRTAP3-3Q9BYR6 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC12.97□□□□□ -0.33
KRTAP3-3Q9BYR6 AC007879.1-201ENST00000435643 554 ntTSL 4 BASIC12.97□□□□□ -0.33
KRTAP3-3Q9BYR6 PSMD10P1-201ENST00000436861 681 ntBASIC12.97□□□□□ -0.33
KRTAP3-3Q9BYR6 AL592447.1-201ENST00000447592 540 ntBASIC12.97□□□□□ -0.33
KRTAP3-3Q9BYR6 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC12.97□□□□□ -0.33
KRTAP3-3Q9BYR6 RNF121-214ENST00000533380 870 ntTSL 3 BASIC12.97□□□□□ -0.33
KRTAP3-3Q9BYR6 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC12.97□□□□□ -0.33
KRTAP3-3Q9BYR6 AC010809.2-201ENST00000560404 964 ntTSL 5 BASIC12.97□□□□□ -0.33
KRTAP3-3Q9BYR6 AC007614.3-201ENST00000564875 654 ntTSL 3 BASIC12.97□□□□□ -0.33
KRTAP3-3Q9BYR6 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC12.97□□□□□ -0.33
KRTAP3-3Q9BYR6 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC12.97□□□□□ -0.33
KRTAP3-3Q9BYR6 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC12.97□□□□□ -0.33
KRTAP3-3Q9BYR6 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC12.97□□□□□ -0.33
KRTAP3-3Q9BYR6 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC12.97□□□□□ -0.33
KRTAP3-3Q9BYR6 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
KRTAP3-3Q9BYR6 AL139393.2-201ENST00000608721 2025 ntBASIC12.96□□□□□ -0.33
KRTAP3-3Q9BYR6 RGN-201ENST00000336169 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
KRTAP3-3Q9BYR6 LSM8-201ENST00000249299 1305 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
KRTAP3-3Q9BYR6 PSMC1P1-201ENST00000478110 1320 ntBASIC12.96□□□□□ -0.33
KRTAP3-3Q9BYR6 FGF21-201ENST00000222157 885 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
KRTAP3-3Q9BYR6 CIB4-201ENST00000288861 773 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
KRTAP3-3Q9BYR6 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms