Protein–RNA interactions for Protein: Q99942

RNF5, E3 ubiquitin-protein ligase RNF5, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF5Q99942 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RNF5Q99942 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
RNF5Q99942 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RNF5Q99942 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RNF5Q99942 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC16.97■□□□□ 0.31
RNF5Q99942 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC16.97■□□□□ 0.31
RNF5Q99942 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RNF5Q99942 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RNF5Q99942 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RNF5Q99942 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
RNF5Q99942 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RNF5Q99942 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RNF5Q99942 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RNF5Q99942 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RNF5Q99942 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
RNF5Q99942 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
RNF5Q99942 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
RNF5Q99942 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
RNF5Q99942 STOX2-205ENST00000513034 807 ntTSL 3 BASIC16.96■□□□□ 0.31
RNF5Q99942 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC16.96■□□□□ 0.31
RNF5Q99942 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC16.96■□□□□ 0.31
RNF5Q99942 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
RNF5Q99942 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RNF5Q99942 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
RNF5Q99942 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
RNF5Q99942 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RNF5Q99942 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
RNF5Q99942 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
RNF5Q99942 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RNF5Q99942 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RNF5Q99942 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC16.96■□□□□ 0.31
RNF5Q99942 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
RNF5Q99942 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
RNF5Q99942 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
RNF5Q99942 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC16.96■□□□□ 0.3
RNF5Q99942 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC16.96■□□□□ 0.3
RNF5Q99942 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC16.96■□□□□ 0.3
RNF5Q99942 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
RNF5Q99942 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
RNF5Q99942 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RNF5Q99942 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RNF5Q99942 PARN-205ENST00000539279 1557 ntTSL 2 BASIC16.95■□□□□ 0.3
RNF5Q99942 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RNF5Q99942 AC053503.5-201ENST00000601508 636 ntBASIC16.95■□□□□ 0.3
RNF5Q99942 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RNF5Q99942 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RNF5Q99942 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC16.95■□□□□ 0.3
RNF5Q99942 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RNF5Q99942 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
RNF5Q99942 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RNF5Q99942 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC16.94■□□□□ 0.3
RNF5Q99942 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
RNF5Q99942 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RNF5Q99942 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RNF5Q99942 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
RNF5Q99942 AC123595.1-201ENST00000440769 1046 ntBASIC16.94■□□□□ 0.3
RNF5Q99942 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RNF5Q99942 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC16.94■□□□□ 0.3
RNF5Q99942 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC16.94■□□□□ 0.3
RNF5Q99942 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RNF5Q99942 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RNF5Q99942 MFF-207ENST00000409565 1548 ntTSL 2 BASIC16.94■□□□□ 0.3
RNF5Q99942 NARF-205ENST00000412079 1760 ntTSL 5 BASIC16.94■□□□□ 0.3
RNF5Q99942 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RNF5Q99942 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
RNF5Q99942 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RNF5Q99942 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
RNF5Q99942 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC16.93■□□□□ 0.3
RNF5Q99942 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RNF5Q99942 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RNF5Q99942 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF5Q99942 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF5Q99942 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF5Q99942 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
RNF5Q99942 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC16.93■□□□□ 0.3
RNF5Q99942 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF5Q99942 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF5Q99942 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
RNF5Q99942 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF5Q99942 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RNF5Q99942 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
RNF5Q99942 RNF146-206ENST00000480444 843 ntTSL 2 BASIC16.93■□□□□ 0.3
RNF5Q99942 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC16.93■□□□□ 0.3
RNF5Q99942 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
RNF5Q99942 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC16.93■□□□□ 0.3
RNF5Q99942 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF5Q99942 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF5Q99942 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF5Q99942 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RNF5Q99942 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF5Q99942 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF5Q99942 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF5Q99942 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF5Q99942 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF5Q99942 STX5-203ENST00000394690 1568 ntTSL 5 BASIC16.93■□□□□ 0.3
RNF5Q99942 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RNF5Q99942 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF5Q99942 CLDN5-201ENST00000403084 2357 ntBASIC16.93■□□□□ 0.3
RNF5Q99942 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF5Q99942 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms