Protein–RNA interactions for Protein: Q8TER5

ARHGEF40, Rho guanine nucleotide exchange factor 40, humanhuman

Predictions only

Length 1,519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40Q8TER5 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC31.96■■■□□ 2.71
ARHGEF40Q8TER5 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
ARHGEF40Q8TER5 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC31.96■■■□□ 2.71
ARHGEF40Q8TER5 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
ARHGEF40Q8TER5 LSM12P1-201ENST00000411836 588 ntBASIC31.95■■■□□ 2.71
ARHGEF40Q8TER5 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC31.95■■■□□ 2.71
ARHGEF40Q8TER5 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC31.95■■■□□ 2.71
ARHGEF40Q8TER5 REXO1L12P-201ENST00000622156 912 ntBASIC31.95■■■□□ 2.71
ARHGEF40Q8TER5 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC31.95■■■□□ 2.71
ARHGEF40Q8TER5 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC31.95■■■□□ 2.71
ARHGEF40Q8TER5 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC31.95■■■□□ 2.7
ARHGEF40Q8TER5 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC31.95■■■□□ 2.7
ARHGEF40Q8TER5 RCN1P1-201ENST00000400413 996 ntBASIC31.95■■■□□ 2.7
ARHGEF40Q8TER5 ABHD17AP6-201ENST00000458502 1044 ntBASIC31.95■■■□□ 2.7
ARHGEF40Q8TER5 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC31.95■■■□□ 2.7
ARHGEF40Q8TER5 REXO2-216ENST00000544196 452 ntTSL 3 BASIC31.95■■■□□ 2.7
ARHGEF40Q8TER5 SPIB-206ENST00000596074 847 ntTSL 2 BASIC31.95■■■□□ 2.7
ARHGEF40Q8TER5 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
ARHGEF40Q8TER5 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC31.94■■■□□ 2.7
ARHGEF40Q8TER5 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC31.94■■■□□ 2.7
ARHGEF40Q8TER5 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
ARHGEF40Q8TER5 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
ARHGEF40Q8TER5 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
ARHGEF40Q8TER5 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC31.94■■■□□ 2.7
ARHGEF40Q8TER5 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC31.94■■■□□ 2.7
ARHGEF40Q8TER5 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC31.94■■■□□ 2.7
ARHGEF40Q8TER5 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC31.93■■■□□ 2.7
ARHGEF40Q8TER5 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
ARHGEF40Q8TER5 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
ARHGEF40Q8TER5 PPOX-219ENST00000544598 813 ntTSL 2 BASIC31.93■■■□□ 2.7
ARHGEF40Q8TER5 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
ARHGEF40Q8TER5 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC31.93■■■□□ 2.7
ARHGEF40Q8TER5 KLF2-202ENST00000592003 564 ntTSL 3 BASIC31.93■■■□□ 2.7
ARHGEF40Q8TER5 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
ARHGEF40Q8TER5 AC008175.2-201ENST00000612840 297 ntBASIC31.93■■■□□ 2.7
ARHGEF40Q8TER5 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC31.93■■■□□ 2.7
ARHGEF40Q8TER5 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
ARHGEF40Q8TER5 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
ARHGEF40Q8TER5 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
ARHGEF40Q8TER5 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC31.92■■■□□ 2.7
ARHGEF40Q8TER5 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
ARHGEF40Q8TER5 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC31.92■■■□□ 2.7
ARHGEF40Q8TER5 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC31.92■■■□□ 2.7
ARHGEF40Q8TER5 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC31.92■■■□□ 2.7
ARHGEF40Q8TER5 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
ARHGEF40Q8TER5 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC31.92■■■□□ 2.7
ARHGEF40Q8TER5 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
ARHGEF40Q8TER5 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC31.92■■■□□ 2.7
ARHGEF40Q8TER5 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC31.92■■■□□ 2.7
ARHGEF40Q8TER5 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC31.92■■■□□ 2.7
ARHGEF40Q8TER5 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
ARHGEF40Q8TER5 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC31.91■■■□□ 2.7
ARHGEF40Q8TER5 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC31.91■■■□□ 2.7
ARHGEF40Q8TER5 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
ARHGEF40Q8TER5 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
ARHGEF40Q8TER5 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC31.9■■■□□ 2.7
ARHGEF40Q8TER5 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC31.9■■■□□ 2.7
ARHGEF40Q8TER5 AC233702.5-201ENST00000584107 538 ntBASIC31.9■■■□□ 2.7
ARHGEF40Q8TER5 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC31.9■■■□□ 2.7
ARHGEF40Q8TER5 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC31.9■■■□□ 2.7
ARHGEF40Q8TER5 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
ARHGEF40Q8TER5 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC31.9■■■□□ 2.7
ARHGEF40Q8TER5 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC31.9■■■□□ 2.7
ARHGEF40Q8TER5 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC31.9■■■□□ 2.7
ARHGEF40Q8TER5 POU5F1P4-201ENST00000413175 1085 ntBASIC31.9■■■□□ 2.7
ARHGEF40Q8TER5 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC31.9■■■□□ 2.7
ARHGEF40Q8TER5 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC31.9■■■□□ 2.7
ARHGEF40Q8TER5 RN7SL471P-201ENST00000580476 299 ntBASIC31.9■■■□□ 2.7
ARHGEF40Q8TER5 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC31.9■■■□□ 2.7
ARHGEF40Q8TER5 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
ARHGEF40Q8TER5 AL355472.2-201ENST00000422958 438 ntBASIC31.89■■■□□ 2.7
ARHGEF40Q8TER5 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
ARHGEF40Q8TER5 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC31.89■■■□□ 2.7
ARHGEF40Q8TER5 DHDH-203ENST00000522614 776 ntTSL 5 BASIC31.89■■■□□ 2.7
ARHGEF40Q8TER5 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC31.89■■■□□ 2.7
ARHGEF40Q8TER5 AL445228.2-201ENST00000605589 952 ntBASIC31.89■■■□□ 2.7
ARHGEF40Q8TER5 AC012306.2-201ENST00000609350 630 ntBASIC31.89■■■□□ 2.7
ARHGEF40Q8TER5 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC31.89■■■□□ 2.69
ARHGEF40Q8TER5 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC31.88■■■□□ 2.69
ARHGEF40Q8TER5 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
ARHGEF40Q8TER5 SLC29A4P2-201ENST00000504749 1089 ntBASIC31.88■■■□□ 2.69
ARHGEF40Q8TER5 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC31.88■■■□□ 2.69
ARHGEF40Q8TER5 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC31.88■■■□□ 2.69
ARHGEF40Q8TER5 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC31.88■■■□□ 2.69
ARHGEF40Q8TER5 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC31.88■■■□□ 2.69
ARHGEF40Q8TER5 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC31.88■■■□□ 2.69
ARHGEF40Q8TER5 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC31.88■■■□□ 2.69
ARHGEF40Q8TER5 AC138932.3-201ENST00000567634 1902 ntBASIC31.87■■■□□ 2.69
ARHGEF40Q8TER5 LINC01960-201ENST00000563759 1884 ntBASIC31.87■■■□□ 2.69
ARHGEF40Q8TER5 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
ARHGEF40Q8TER5 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC31.87■■■□□ 2.69
ARHGEF40Q8TER5 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC31.87■■■□□ 2.69
ARHGEF40Q8TER5 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC31.87■■■□□ 2.69
ARHGEF40Q8TER5 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC31.87■■■□□ 2.69
ARHGEF40Q8TER5 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
ARHGEF40Q8TER5 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC31.87■■■□□ 2.69
ARHGEF40Q8TER5 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
ARHGEF40Q8TER5 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
ARHGEF40Q8TER5 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC31.87■■■□□ 2.69
ARHGEF40Q8TER5 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms