Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.17
SCN4BQ8IWT1 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
SCN4BQ8IWT1 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC22.39■■□□□ 1.17
SCN4BQ8IWT1 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC22.39■■□□□ 1.17
SCN4BQ8IWT1 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC22.39■■□□□ 1.17
SCN4BQ8IWT1 RAP2CP1-201ENST00000605103 478 ntBASIC22.39■■□□□ 1.17
SCN4BQ8IWT1 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC22.39■■□□□ 1.17
SCN4BQ8IWT1 AC003102.1-202ENST00000563394 1796 ntBASIC22.39■■□□□ 1.17
SCN4BQ8IWT1 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
SCN4BQ8IWT1 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC22.39■■□□□ 1.17
SCN4BQ8IWT1 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
SCN4BQ8IWT1 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC22.38■■□□□ 1.17
SCN4BQ8IWT1 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC22.38■■□□□ 1.17
SCN4BQ8IWT1 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
SCN4BQ8IWT1 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
SCN4BQ8IWT1 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
SCN4BQ8IWT1 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
SCN4BQ8IWT1 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
SCN4BQ8IWT1 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
SCN4BQ8IWT1 NAA20-201ENST00000310450 920 ntTSL 2 BASIC22.38■■□□□ 1.17
SCN4BQ8IWT1 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC22.38■■□□□ 1.17
SCN4BQ8IWT1 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
SCN4BQ8IWT1 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC22.38■■□□□ 1.17
SCN4BQ8IWT1 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC22.38■■□□□ 1.17
SCN4BQ8IWT1 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
SCN4BQ8IWT1 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
SCN4BQ8IWT1 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
SCN4BQ8IWT1 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
SCN4BQ8IWT1 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
SCN4BQ8IWT1 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
SCN4BQ8IWT1 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
SCN4BQ8IWT1 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
SCN4BQ8IWT1 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC22.37■■□□□ 1.17
SCN4BQ8IWT1 METTL26-203ENST00000397664 604 ntTSL 2 BASIC22.37■■□□□ 1.17
SCN4BQ8IWT1 RNF146-206ENST00000480444 843 ntTSL 2 BASIC22.37■■□□□ 1.17
SCN4BQ8IWT1 BRI3-207ENST00000539286 699 ntTSL 2 BASIC22.37■■□□□ 1.17
SCN4BQ8IWT1 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC22.37■■□□□ 1.17
SCN4BQ8IWT1 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
SCN4BQ8IWT1 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
SCN4BQ8IWT1 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
SCN4BQ8IWT1 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
SCN4BQ8IWT1 GUSBP5-202ENST00000510805 1989 ntBASIC22.36■■□□□ 1.17
SCN4BQ8IWT1 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
SCN4BQ8IWT1 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
SCN4BQ8IWT1 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
SCN4BQ8IWT1 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
SCN4BQ8IWT1 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC22.36■■□□□ 1.17
SCN4BQ8IWT1 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
SCN4BQ8IWT1 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC22.36■■□□□ 1.17
SCN4BQ8IWT1 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
SCN4BQ8IWT1 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC22.36■■□□□ 1.17
SCN4BQ8IWT1 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
SCN4BQ8IWT1 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
SCN4BQ8IWT1 TK2-208ENST00000545043 1120 ntTSL 2 BASIC22.36■■□□□ 1.17
SCN4BQ8IWT1 KRT18P20-201ENST00000548986 1279 ntBASIC22.36■■□□□ 1.17
SCN4BQ8IWT1 SLC7A5P2-201ENST00000553010 536 ntBASIC22.36■■□□□ 1.17
SCN4BQ8IWT1 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC22.36■■□□□ 1.17
SCN4BQ8IWT1 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
SCN4BQ8IWT1 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC22.36■■□□□ 1.17
SCN4BQ8IWT1 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC22.36■■□□□ 1.17
SCN4BQ8IWT1 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
SCN4BQ8IWT1 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC22.36■■□□□ 1.17
SCN4BQ8IWT1 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
SCN4BQ8IWT1 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
SCN4BQ8IWT1 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
SCN4BQ8IWT1 FAM99A-202ENST00000538190 1989 ntBASIC22.36■■□□□ 1.17
SCN4BQ8IWT1 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
SCN4BQ8IWT1 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
SCN4BQ8IWT1 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
SCN4BQ8IWT1 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
SCN4BQ8IWT1 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
SCN4BQ8IWT1 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
SCN4BQ8IWT1 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC22.35■■□□□ 1.17
SCN4BQ8IWT1 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC22.35■■□□□ 1.17
SCN4BQ8IWT1 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC22.35■■□□□ 1.17
SCN4BQ8IWT1 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
SCN4BQ8IWT1 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
SCN4BQ8IWT1 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
SCN4BQ8IWT1 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC22.35■■□□□ 1.17
SCN4BQ8IWT1 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC22.35■■□□□ 1.17
SCN4BQ8IWT1 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
SCN4BQ8IWT1 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
SCN4BQ8IWT1 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
SCN4BQ8IWT1 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
SCN4BQ8IWT1 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
SCN4BQ8IWT1 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
SCN4BQ8IWT1 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC22.34■■□□□ 1.17
SCN4BQ8IWT1 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
SCN4BQ8IWT1 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
SCN4BQ8IWT1 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC22.34■■□□□ 1.17
SCN4BQ8IWT1 AC242852.2-201ENST00000615738 1807 ntBASIC22.34■■□□□ 1.17
SCN4BQ8IWT1 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
SCN4BQ8IWT1 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
SCN4BQ8IWT1 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
SCN4BQ8IWT1 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
SCN4BQ8IWT1 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC22.34■■□□□ 1.17
SCN4BQ8IWT1 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC22.34■■□□□ 1.17
SCN4BQ8IWT1 AC008175.2-201ENST00000612840 297 ntBASIC22.34■■□□□ 1.17
SCN4BQ8IWT1 GXYLT1P5-201ENST00000614548 1189 ntBASIC22.34■■□□□ 1.17
SCN4BQ8IWT1 MDK-213ENST00000617138 635 ntTSL 2 BASIC22.34■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms