Protein–RNA interactions for Protein: Q86WR0

CCDC25, Coiled-coil domain-containing protein 25, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25Q86WR0 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC21.82■■□□□ 1.08
CCDC25Q86WR0 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC25Q86WR0 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC25Q86WR0 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC25Q86WR0 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC25Q86WR0 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC25Q86WR0 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC25Q86WR0 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC21.82■■□□□ 1.08
CCDC25Q86WR0 LINC01006-201ENST00000333319 2292 ntBASIC21.82■■□□□ 1.08
CCDC25Q86WR0 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC25Q86WR0 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.82■■□□□ 1.08
CCDC25Q86WR0 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC25Q86WR0 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC25Q86WR0 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC21.82■■□□□ 1.08
CCDC25Q86WR0 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
CCDC25Q86WR0 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC25Q86WR0 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
CCDC25Q86WR0 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
CCDC25Q86WR0 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC21.81■■□□□ 1.08
CCDC25Q86WR0 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC25Q86WR0 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC25Q86WR0 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC25Q86WR0 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC25Q86WR0 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
CCDC25Q86WR0 MIR6724-1-201ENST00000616420 92 ntBASIC21.81■■□□□ 1.08
CCDC25Q86WR0 MIR6724-2-201ENST00000616483 92 ntBASIC21.81■■□□□ 1.08
CCDC25Q86WR0 MIR6724-4-201ENST00000617390 92 ntBASIC21.81■■□□□ 1.08
CCDC25Q86WR0 MIR6724-3-201ENST00000622482 92 ntBASIC21.81■■□□□ 1.08
CCDC25Q86WR0 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC25Q86WR0 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC21.81■■□□□ 1.08
CCDC25Q86WR0 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC21.81■■□□□ 1.08
CCDC25Q86WR0 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC25Q86WR0 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC25Q86WR0 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC25Q86WR0 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC21.81■■□□□ 1.08
CCDC25Q86WR0 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC25Q86WR0 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
CCDC25Q86WR0 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC25Q86WR0 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC25Q86WR0 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC25Q86WR0 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC21.8■■□□□ 1.08
CCDC25Q86WR0 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC21.8■■□□□ 1.08
CCDC25Q86WR0 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC25Q86WR0 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
CCDC25Q86WR0 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.8■■□□□ 1.08
CCDC25Q86WR0 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.8■■□□□ 1.08
CCDC25Q86WR0 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
CCDC25Q86WR0 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC25Q86WR0 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
CCDC25Q86WR0 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC25Q86WR0 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC21.79■■□□□ 1.08
CCDC25Q86WR0 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC25Q86WR0 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC25Q86WR0 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC25Q86WR0 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC25Q86WR0 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC21.79■■□□□ 1.08
CCDC25Q86WR0 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC25Q86WR0 RBM38-205ENST00000440234 686 ntTSL 2 BASIC21.79■■□□□ 1.08
CCDC25Q86WR0 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
CCDC25Q86WR0 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC21.79■■□□□ 1.08
CCDC25Q86WR0 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC25Q86WR0 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC25Q86WR0 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC21.79■■□□□ 1.08
CCDC25Q86WR0 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC25Q86WR0 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC25Q86WR0 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC25Q86WR0 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC25Q86WR0 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC25Q86WR0 AK3-203ENST00000447596 705 ntTSL 2 BASIC21.78■■□□□ 1.08
CCDC25Q86WR0 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC21.78■■□□□ 1.08
CCDC25Q86WR0 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.78■■□□□ 1.08
CCDC25Q86WR0 AC099791.2-201ENST00000605725 427 ntBASIC21.78■■□□□ 1.08
CCDC25Q86WR0 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC25Q86WR0 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC25Q86WR0 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC25Q86WR0 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC25Q86WR0 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC25Q86WR0 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC25Q86WR0 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC21.77■■□□□ 1.08
CCDC25Q86WR0 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC25Q86WR0 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC21.77■■□□□ 1.08
CCDC25Q86WR0 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC25Q86WR0 AC009299.2-201ENST00000482477 511 ntBASIC21.77■■□□□ 1.08
CCDC25Q86WR0 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC25Q86WR0 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
CCDC25Q86WR0 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC25Q86WR0 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.07
CCDC25Q86WR0 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC21.77■■□□□ 1.07
CCDC25Q86WR0 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC25Q86WR0 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC25Q86WR0 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC25Q86WR0 RARRES2P1-201ENST00000474487 481 ntBASIC21.76■■□□□ 1.07
CCDC25Q86WR0 UNC93B8-201ENST00000511903 705 ntBASIC21.76■■□□□ 1.07
CCDC25Q86WR0 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC21.76■■□□□ 1.07
CCDC25Q86WR0 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC25Q86WR0 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC21.76■■□□□ 1.07
CCDC25Q86WR0 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC25Q86WR0 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCDC25Q86WR0 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
CCDC25Q86WR0 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms