Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
ZNF546Q86UE3 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
ZNF546Q86UE3 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ZNF546Q86UE3 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ZNF546Q86UE3 AP005212.1-201ENST00000581547 1997 ntBASIC17.6■□□□□ 0.41
ZNF546Q86UE3 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ZNF546Q86UE3 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ZNF546Q86UE3 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ZNF546Q86UE3 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ZNF546Q86UE3 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ZNF546Q86UE3 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC17.59■□□□□ 0.41
ZNF546Q86UE3 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ZNF546Q86UE3 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ZNF546Q86UE3 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ZNF546Q86UE3 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ZNF546Q86UE3 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ZNF546Q86UE3 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC17.59■□□□□ 0.41
ZNF546Q86UE3 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC17.59■□□□□ 0.41
ZNF546Q86UE3 CA15P2-201ENST00000611168 834 ntBASIC17.59■□□□□ 0.41
ZNF546Q86UE3 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
ZNF546Q86UE3 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
ZNF546Q86UE3 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.59■□□□□ 0.41
ZNF546Q86UE3 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.59■□□□□ 0.41
ZNF546Q86UE3 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.59■□□□□ 0.41
ZNF546Q86UE3 ME2-216ENST00000639850 2331 ntTSL 5 BASIC17.59■□□□□ 0.41
ZNF546Q86UE3 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ZNF546Q86UE3 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ZNF546Q86UE3 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC17.59■□□□□ 0.41
ZNF546Q86UE3 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
ZNF546Q86UE3 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC17.58■□□□□ 0.41
ZNF546Q86UE3 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
ZNF546Q86UE3 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.58■□□□□ 0.41
ZNF546Q86UE3 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
ZNF546Q86UE3 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC17.58■□□□□ 0.41
ZNF546Q86UE3 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
ZNF546Q86UE3 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ZNF546Q86UE3 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ZNF546Q86UE3 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ZNF546Q86UE3 LBH-205ENST00000407930 756 ntTSL 2 BASIC17.58■□□□□ 0.4
ZNF546Q86UE3 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC17.58■□□□□ 0.4
ZNF546Q86UE3 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC17.58■□□□□ 0.4
ZNF546Q86UE3 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ZNF546Q86UE3 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
ZNF546Q86UE3 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ZNF546Q86UE3 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC17.58■□□□□ 0.4
ZNF546Q86UE3 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ZNF546Q86UE3 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ZNF546Q86UE3 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
ZNF546Q86UE3 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
ZNF546Q86UE3 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ZNF546Q86UE3 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF546Q86UE3 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC17.57■□□□□ 0.4
ZNF546Q86UE3 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF546Q86UE3 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF546Q86UE3 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF546Q86UE3 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF546Q86UE3 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
ZNF546Q86UE3 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF546Q86UE3 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF546Q86UE3 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
ZNF546Q86UE3 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ZNF546Q86UE3 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
ZNF546Q86UE3 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC17.57■□□□□ 0.4
ZNF546Q86UE3 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
ZNF546Q86UE3 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
ZNF546Q86UE3 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ZNF546Q86UE3 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ZNF546Q86UE3 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ZNF546Q86UE3 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
ZNF546Q86UE3 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ZNF546Q86UE3 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ZNF546Q86UE3 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
ZNF546Q86UE3 MFF-203ENST00000349901 1716 ntTSL 2 BASIC17.56■□□□□ 0.4
ZNF546Q86UE3 HYI-213ENST00000583037 1322 ntTSL 5 BASIC17.56■□□□□ 0.4
ZNF546Q86UE3 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC17.56■□□□□ 0.4
ZNF546Q86UE3 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ZNF546Q86UE3 HYI-210ENST00000486909 905 ntTSL 5 BASIC17.56■□□□□ 0.4
ZNF546Q86UE3 AC022616.5-201ENST00000518796 181 ntBASIC17.56■□□□□ 0.4
ZNF546Q86UE3 AC104564.3-201ENST00000582367 638 ntBASIC17.56■□□□□ 0.4
ZNF546Q86UE3 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ZNF546Q86UE3 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ZNF546Q86UE3 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
ZNF546Q86UE3 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ZNF546Q86UE3 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
ZNF546Q86UE3 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ZNF546Q86UE3 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.56■□□□□ 0.4
ZNF546Q86UE3 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ZNF546Q86UE3 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
ZNF546Q86UE3 LINC01529-204ENST00000636474 1715 ntBASIC17.55■□□□□ 0.4
ZNF546Q86UE3 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZNF546Q86UE3 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZNF546Q86UE3 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZNF546Q86UE3 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC17.55■□□□□ 0.4
ZNF546Q86UE3 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
ZNF546Q86UE3 GAK-223ENST00000628912 497 ntTSL 5 BASIC17.55■□□□□ 0.4
ZNF546Q86UE3 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC17.55■□□□□ 0.4
ZNF546Q86UE3 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC17.55■□□□□ 0.4
ZNF546Q86UE3 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC17.55■□□□□ 0.4
ZNF546Q86UE3 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZNF546Q86UE3 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms