Protein–RNA interactions for Protein: Q6ZP82

CCDC141, Coiled-coil domain-containing protein 141, humanhuman

Predictions only

Length 1,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC141Q6ZP82 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
CCDC141Q6ZP82 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC31.98■■■□□ 2.71
CCDC141Q6ZP82 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
CCDC141Q6ZP82 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC31.98■■■□□ 2.71
CCDC141Q6ZP82 DUSP5P2-201ENST00000426873 1033 ntBASIC31.98■■■□□ 2.71
CCDC141Q6ZP82 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC31.98■■■□□ 2.71
CCDC141Q6ZP82 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC31.98■■■□□ 2.71
CCDC141Q6ZP82 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
CCDC141Q6ZP82 AC061975.6-201ENST00000579045 1553 ntBASIC31.98■■■□□ 2.71
CCDC141Q6ZP82 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
CCDC141Q6ZP82 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
CCDC141Q6ZP82 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
CCDC141Q6ZP82 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
CCDC141Q6ZP82 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC31.97■■■□□ 2.71
CCDC141Q6ZP82 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC31.97■■■□□ 2.71
CCDC141Q6ZP82 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
CCDC141Q6ZP82 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
CCDC141Q6ZP82 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
CCDC141Q6ZP82 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC31.97■■■□□ 2.71
CCDC141Q6ZP82 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
CCDC141Q6ZP82 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC31.97■■■□□ 2.71
CCDC141Q6ZP82 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC31.97■■■□□ 2.71
CCDC141Q6ZP82 ADM-205ENST00000528544 586 ntTSL 2 BASIC31.97■■■□□ 2.71
CCDC141Q6ZP82 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC31.97■■■□□ 2.71
CCDC141Q6ZP82 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC31.96■■■□□ 2.71
CCDC141Q6ZP82 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC31.96■■■□□ 2.71
CCDC141Q6ZP82 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC31.96■■■□□ 2.71
CCDC141Q6ZP82 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
CCDC141Q6ZP82 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC31.96■■■□□ 2.71
CCDC141Q6ZP82 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC31.96■■■□□ 2.71
CCDC141Q6ZP82 RARG-204ENST00000543726 1779 ntTSL 2 BASIC31.96■■■□□ 2.71
CCDC141Q6ZP82 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC31.96■■■□□ 2.71
CCDC141Q6ZP82 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
CCDC141Q6ZP82 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC31.96■■■□□ 2.71
CCDC141Q6ZP82 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
CCDC141Q6ZP82 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC31.96■■■□□ 2.71
CCDC141Q6ZP82 KRT18P29-201ENST00000397031 1267 ntBASIC31.96■■■□□ 2.71
CCDC141Q6ZP82 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC31.96■■■□□ 2.71
CCDC141Q6ZP82 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC31.96■■■□□ 2.71
CCDC141Q6ZP82 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC31.96■■■□□ 2.71
CCDC141Q6ZP82 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
CCDC141Q6ZP82 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC31.95■■■□□ 2.71
CCDC141Q6ZP82 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
CCDC141Q6ZP82 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
CCDC141Q6ZP82 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC31.95■■■□□ 2.71
CCDC141Q6ZP82 RPS2P52-201ENST00000469610 820 ntBASIC31.95■■■□□ 2.7
CCDC141Q6ZP82 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC31.95■■■□□ 2.7
CCDC141Q6ZP82 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.7
CCDC141Q6ZP82 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
CCDC141Q6ZP82 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
CCDC141Q6ZP82 GAS7-202ENST00000396115 929 ntTSL 5 BASIC31.94■■■□□ 2.7
CCDC141Q6ZP82 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC31.94■■■□□ 2.7
CCDC141Q6ZP82 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC31.94■■■□□ 2.7
CCDC141Q6ZP82 AL591742.1-201ENST00000604433 565 ntBASIC31.94■■■□□ 2.7
CCDC141Q6ZP82 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC31.94■■■□□ 2.7
CCDC141Q6ZP82 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC31.93■■■□□ 2.7
CCDC141Q6ZP82 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC31.93■■■□□ 2.7
CCDC141Q6ZP82 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
CCDC141Q6ZP82 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC31.93■■■□□ 2.7
CCDC141Q6ZP82 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC31.93■■■□□ 2.7
CCDC141Q6ZP82 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
CCDC141Q6ZP82 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC31.93■■■□□ 2.7
CCDC141Q6ZP82 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
CCDC141Q6ZP82 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC31.92■■■□□ 2.7
CCDC141Q6ZP82 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC31.92■■■□□ 2.7
CCDC141Q6ZP82 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC31.92■■■□□ 2.7
CCDC141Q6ZP82 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
CCDC141Q6ZP82 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC31.92■■■□□ 2.7
CCDC141Q6ZP82 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC31.92■■■□□ 2.7
CCDC141Q6ZP82 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
CCDC141Q6ZP82 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC31.92■■■□□ 2.7
CCDC141Q6ZP82 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
CCDC141Q6ZP82 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC31.91■■■□□ 2.7
CCDC141Q6ZP82 BET1L-207ENST00000529614 560 ntTSL 5 BASIC31.91■■■□□ 2.7
CCDC141Q6ZP82 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC31.91■■■□□ 2.7
CCDC141Q6ZP82 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC31.91■■■□□ 2.7
CCDC141Q6ZP82 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
CCDC141Q6ZP82 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
CCDC141Q6ZP82 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
CCDC141Q6ZP82 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC31.91■■■□□ 2.7
CCDC141Q6ZP82 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
CCDC141Q6ZP82 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC31.91■■■□□ 2.7
CCDC141Q6ZP82 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
CCDC141Q6ZP82 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC31.91■■■□□ 2.7
CCDC141Q6ZP82 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC31.91■■■□□ 2.7
CCDC141Q6ZP82 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC31.91■■■□□ 2.7
CCDC141Q6ZP82 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC31.91■■■□□ 2.7
CCDC141Q6ZP82 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC31.91■■■□□ 2.7
CCDC141Q6ZP82 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
CCDC141Q6ZP82 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
CCDC141Q6ZP82 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
CCDC141Q6ZP82 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
CCDC141Q6ZP82 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
CCDC141Q6ZP82 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC31.9■■■□□ 2.7
CCDC141Q6ZP82 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC31.9■■■□□ 2.7
CCDC141Q6ZP82 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
CCDC141Q6ZP82 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
CCDC141Q6ZP82 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC31.9■■■□□ 2.7
CCDC141Q6ZP82 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC31.9■■■□□ 2.7
CCDC141Q6ZP82 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms