Protein–RNA interactions for Protein: Q6DN03

HIST2H2BC, Putative histone H2B type 2-C, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H2BCQ6DN03 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HIST2H2BCQ6DN03 FXN-202ENST00000396364 980 ntTSL 5 BASIC18.4■□□□□ 0.54
HIST2H2BCQ6DN03 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.4■□□□□ 0.54
HIST2H2BCQ6DN03 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC18.4■□□□□ 0.54
HIST2H2BCQ6DN03 DHDH-203ENST00000522614 776 ntTSL 5 BASIC18.4■□□□□ 0.54
HIST2H2BCQ6DN03 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HIST2H2BCQ6DN03 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HIST2H2BCQ6DN03 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC18.4■□□□□ 0.54
HIST2H2BCQ6DN03 SOX15-203ENST00000570788 1093 ntBASIC18.4■□□□□ 0.54
HIST2H2BCQ6DN03 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC18.4■□□□□ 0.54
HIST2H2BCQ6DN03 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC18.4■□□□□ 0.54
HIST2H2BCQ6DN03 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.4■□□□□ 0.54
HIST2H2BCQ6DN03 AL590326.2-201ENST00000625139 305 ntBASIC18.4■□□□□ 0.54
HIST2H2BCQ6DN03 AL353803.4-201ENST00000565882 1934 ntBASIC18.4■□□□□ 0.54
HIST2H2BCQ6DN03 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HIST2H2BCQ6DN03 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
HIST2H2BCQ6DN03 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HIST2H2BCQ6DN03 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HIST2H2BCQ6DN03 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
HIST2H2BCQ6DN03 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC18.39■□□□□ 0.53
HIST2H2BCQ6DN03 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HIST2H2BCQ6DN03 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.39■□□□□ 0.53
HIST2H2BCQ6DN03 EEF1DP3-203ENST00000566025 782 ntBASIC18.39■□□□□ 0.53
HIST2H2BCQ6DN03 FGF8-207ENST00000618991 856 ntTSL 3 BASIC18.39■□□□□ 0.53
HIST2H2BCQ6DN03 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.39■□□□□ 0.53
HIST2H2BCQ6DN03 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HIST2H2BCQ6DN03 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HIST2H2BCQ6DN03 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HIST2H2BCQ6DN03 AC092368.3-202ENST00000574180 1591 ntBASIC18.38■□□□□ 0.53
HIST2H2BCQ6DN03 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HIST2H2BCQ6DN03 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HIST2H2BCQ6DN03 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HIST2H2BCQ6DN03 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.38■□□□□ 0.53
HIST2H2BCQ6DN03 TPM1-226ENST00000560959 925 ntTSL 2 BASIC18.38■□□□□ 0.53
HIST2H2BCQ6DN03 USF2-205ENST00000594064 1179 ntTSL 2 BASIC18.38■□□□□ 0.53
HIST2H2BCQ6DN03 AL121894.2-201ENST00000602977 491 ntBASIC18.38■□□□□ 0.53
HIST2H2BCQ6DN03 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HIST2H2BCQ6DN03 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC18.38■□□□□ 0.53
HIST2H2BCQ6DN03 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC18.38■□□□□ 0.53
HIST2H2BCQ6DN03 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HIST2H2BCQ6DN03 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HIST2H2BCQ6DN03 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.37■□□□□ 0.53
HIST2H2BCQ6DN03 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.37■□□□□ 0.53
HIST2H2BCQ6DN03 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC18.37■□□□□ 0.53
HIST2H2BCQ6DN03 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC18.37■□□□□ 0.53
HIST2H2BCQ6DN03 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.37■□□□□ 0.53
HIST2H2BCQ6DN03 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC18.37■□□□□ 0.53
HIST2H2BCQ6DN03 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.37■□□□□ 0.53
HIST2H2BCQ6DN03 RMI2-205ENST00000576027 818 ntTSL 2 BASIC18.37■□□□□ 0.53
HIST2H2BCQ6DN03 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.37■□□□□ 0.53
HIST2H2BCQ6DN03 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC18.37■□□□□ 0.53
HIST2H2BCQ6DN03 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
HIST2H2BCQ6DN03 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
HIST2H2BCQ6DN03 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HIST2H2BCQ6DN03 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
HIST2H2BCQ6DN03 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC18.37■□□□□ 0.53
HIST2H2BCQ6DN03 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HIST2H2BCQ6DN03 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HIST2H2BCQ6DN03 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
HIST2H2BCQ6DN03 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
HIST2H2BCQ6DN03 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.36■□□□□ 0.53
HIST2H2BCQ6DN03 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
HIST2H2BCQ6DN03 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC18.36■□□□□ 0.53
HIST2H2BCQ6DN03 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC18.36■□□□□ 0.53
HIST2H2BCQ6DN03 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.36■□□□□ 0.53
HIST2H2BCQ6DN03 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.36■□□□□ 0.53
HIST2H2BCQ6DN03 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC18.36■□□□□ 0.53
HIST2H2BCQ6DN03 AP004607.7-201ENST00000527152 1677 ntBASIC18.36■□□□□ 0.53
HIST2H2BCQ6DN03 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.36■□□□□ 0.53
HIST2H2BCQ6DN03 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
HIST2H2BCQ6DN03 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
HIST2H2BCQ6DN03 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HIST2H2BCQ6DN03 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
HIST2H2BCQ6DN03 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.36■□□□□ 0.53
HIST2H2BCQ6DN03 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
HIST2H2BCQ6DN03 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HIST2H2BCQ6DN03 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC18.35■□□□□ 0.53
HIST2H2BCQ6DN03 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC18.35■□□□□ 0.53
HIST2H2BCQ6DN03 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
HIST2H2BCQ6DN03 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC18.35■□□□□ 0.53
HIST2H2BCQ6DN03 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
HIST2H2BCQ6DN03 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HIST2H2BCQ6DN03 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.35■□□□□ 0.53
HIST2H2BCQ6DN03 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC18.35■□□□□ 0.53
HIST2H2BCQ6DN03 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HIST2H2BCQ6DN03 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HIST2H2BCQ6DN03 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HIST2H2BCQ6DN03 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18.35■□□□□ 0.53
HIST2H2BCQ6DN03 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
HIST2H2BCQ6DN03 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.35■□□□□ 0.53
HIST2H2BCQ6DN03 MIR4785-201ENST00000585005 73 ntBASIC18.35■□□□□ 0.53
HIST2H2BCQ6DN03 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC18.35■□□□□ 0.53
HIST2H2BCQ6DN03 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.35■□□□□ 0.53
HIST2H2BCQ6DN03 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HIST2H2BCQ6DN03 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HIST2H2BCQ6DN03 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC18.35■□□□□ 0.53
HIST2H2BCQ6DN03 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.35■□□□□ 0.53
HIST2H2BCQ6DN03 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HIST2H2BCQ6DN03 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
HIST2H2BCQ6DN03 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms