Protein–RNA interactions for Protein: Q61112

Sdf4, 45 kDa calcium-binding protein, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf4Q61112 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC18.95■□□□□ 0.62
Sdf4Q61112 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sdf4Q61112 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sdf4Q61112 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sdf4Q61112 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sdf4Q61112 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sdf4Q61112 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Sdf4Q61112 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sdf4Q61112 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sdf4Q61112 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sdf4Q61112 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Sdf4Q61112 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sdf4Q61112 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Sdf4Q61112 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC18.94■□□□□ 0.62
Sdf4Q61112 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.94■□□□□ 0.62
Sdf4Q61112 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sdf4Q61112 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.94■□□□□ 0.62
Sdf4Q61112 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sdf4Q61112 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sdf4Q61112 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sdf4Q61112 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sdf4Q61112 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sdf4Q61112 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sdf4Q61112 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sdf4Q61112 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sdf4Q61112 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Sdf4Q61112 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sdf4Q61112 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sdf4Q61112 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Sdf4Q61112 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sdf4Q61112 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sdf4Q61112 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Sdf4Q61112 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Sdf4Q61112 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sdf4Q61112 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sdf4Q61112 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Sdf4Q61112 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC18.92■□□□□ 0.62
Sdf4Q61112 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC18.92■□□□□ 0.62
Sdf4Q61112 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sdf4Q61112 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.92■□□□□ 0.62
Sdf4Q61112 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Sdf4Q61112 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sdf4Q61112 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sdf4Q61112 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sdf4Q61112 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Sdf4Q61112 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sdf4Q61112 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sdf4Q61112 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sdf4Q61112 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sdf4Q61112 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Sdf4Q61112 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sdf4Q61112 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Sdf4Q61112 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sdf4Q61112 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sdf4Q61112 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sdf4Q61112 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sdf4Q61112 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sdf4Q61112 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Sdf4Q61112 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sdf4Q61112 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Sdf4Q61112 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sdf4Q61112 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sdf4Q61112 AV356131-201ENSMUST00000206201 750 ntBASIC18.9■□□□□ 0.62
Sdf4Q61112 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Sdf4Q61112 Ap3s1-204ENSMUST00000225520 957 ntBASIC18.9■□□□□ 0.62
Sdf4Q61112 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sdf4Q61112 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.9■□□□□ 0.62
Sdf4Q61112 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
Sdf4Q61112 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sdf4Q61112 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sdf4Q61112 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Sdf4Q61112 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sdf4Q61112 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Sdf4Q61112 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Sdf4Q61112 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Sdf4Q61112 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sdf4Q61112 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sdf4Q61112 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Sdf4Q61112 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
Sdf4Q61112 Gm19094-201ENSMUST00000209791 1246 ntBASIC18.89■□□□□ 0.61
Sdf4Q61112 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sdf4Q61112 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sdf4Q61112 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Sdf4Q61112 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sdf4Q61112 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Sdf4Q61112 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sdf4Q61112 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sdf4Q61112 BC021767-201ENSMUST00000126387 1716 ntBASIC18.88■□□□□ 0.61
Sdf4Q61112 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sdf4Q61112 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sdf4Q61112 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Sdf4Q61112 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sdf4Q61112 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sdf4Q61112 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sdf4Q61112 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC18.88■□□□□ 0.61
Sdf4Q61112 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Sdf4Q61112 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sdf4Q61112 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Sdf4Q61112 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sdf4Q61112 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC18.88■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms