Protein–RNA interactions for Protein: Q5EBM4

ZNF542P, Putative zinc finger protein 542, humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF542PQ5EBM4 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
ZNF542PQ5EBM4 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ZNF542PQ5EBM4 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
ZNF542PQ5EBM4 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.83■□□□□ 0.93
ZNF542PQ5EBM4 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ZNF542PQ5EBM4 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.83■□□□□ 0.93
ZNF542PQ5EBM4 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.83■□□□□ 0.93
ZNF542PQ5EBM4 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ZNF542PQ5EBM4 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.83■□□□□ 0.93
ZNF542PQ5EBM4 CD99P1-205ENST00000527459 561 ntBASIC20.83■□□□□ 0.93
ZNF542PQ5EBM4 AC013268.1-206ENST00000638368 961 ntBASIC20.83■□□□□ 0.93
ZNF542PQ5EBM4 AC112229.1-201ENST00000639295 961 ntBASIC20.83■□□□□ 0.93
ZNF542PQ5EBM4 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ZNF542PQ5EBM4 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ZNF542PQ5EBM4 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ZNF542PQ5EBM4 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.83■□□□□ 0.92
ZNF542PQ5EBM4 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
ZNF542PQ5EBM4 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
ZNF542PQ5EBM4 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
ZNF542PQ5EBM4 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ZNF542PQ5EBM4 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.82■□□□□ 0.92
ZNF542PQ5EBM4 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ZNF542PQ5EBM4 AC068338.2-201ENST00000563278 1430 ntBASIC20.82■□□□□ 0.92
ZNF542PQ5EBM4 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC20.82■□□□□ 0.92
ZNF542PQ5EBM4 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.82■□□□□ 0.92
ZNF542PQ5EBM4 SLC7A5P1-201ENST00000568957 537 ntBASIC20.82■□□□□ 0.92
ZNF542PQ5EBM4 AC080038.3-201ENST00000623346 1952 ntBASIC20.82■□□□□ 0.92
ZNF542PQ5EBM4 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.82■□□□□ 0.92
ZNF542PQ5EBM4 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.81■□□□□ 0.92
ZNF542PQ5EBM4 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ZNF542PQ5EBM4 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ZNF542PQ5EBM4 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ZNF542PQ5EBM4 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
ZNF542PQ5EBM4 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.81■□□□□ 0.92
ZNF542PQ5EBM4 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ZNF542PQ5EBM4 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
ZNF542PQ5EBM4 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ZNF542PQ5EBM4 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ZNF542PQ5EBM4 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.81■□□□□ 0.92
ZNF542PQ5EBM4 AC098934.4-201ENST00000564127 592 ntBASIC20.81■□□□□ 0.92
ZNF542PQ5EBM4 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.81■□□□□ 0.92
ZNF542PQ5EBM4 AC008175.2-201ENST00000612840 297 ntBASIC20.81■□□□□ 0.92
ZNF542PQ5EBM4 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ZNF542PQ5EBM4 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
ZNF542PQ5EBM4 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
ZNF542PQ5EBM4 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ZNF542PQ5EBM4 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
ZNF542PQ5EBM4 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.8■□□□□ 0.92
ZNF542PQ5EBM4 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
ZNF542PQ5EBM4 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.8■□□□□ 0.92
ZNF542PQ5EBM4 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
ZNF542PQ5EBM4 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.8■□□□□ 0.92
ZNF542PQ5EBM4 AC133552.2-202ENST00000575694 574 ntBASIC20.8■□□□□ 0.92
ZNF542PQ5EBM4 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
ZNF542PQ5EBM4 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.8■□□□□ 0.92
ZNF542PQ5EBM4 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.8■□□□□ 0.92
ZNF542PQ5EBM4 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ZNF542PQ5EBM4 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ZNF542PQ5EBM4 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ZNF542PQ5EBM4 CYP2T1P-201ENST00000432607 1285 ntBASIC20.79■□□□□ 0.92
ZNF542PQ5EBM4 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.79■□□□□ 0.92
ZNF542PQ5EBM4 TSPY20P-201ENST00000450910 630 ntBASIC20.79■□□□□ 0.92
ZNF542PQ5EBM4 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ZNF542PQ5EBM4 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.79■□□□□ 0.92
ZNF542PQ5EBM4 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.79■□□□□ 0.92
ZNF542PQ5EBM4 AC120498.10-201ENST00000621827 505 ntBASIC20.79■□□□□ 0.92
ZNF542PQ5EBM4 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.79■□□□□ 0.92
ZNF542PQ5EBM4 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.79■□□□□ 0.92
ZNF542PQ5EBM4 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.79■□□□□ 0.92
ZNF542PQ5EBM4 AC003102.1-202ENST00000563394 1796 ntBASIC20.79■□□□□ 0.92
ZNF542PQ5EBM4 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF542PQ5EBM4 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF542PQ5EBM4 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF542PQ5EBM4 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.78■□□□□ 0.92
ZNF542PQ5EBM4 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF542PQ5EBM4 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF542PQ5EBM4 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.78■□□□□ 0.92
ZNF542PQ5EBM4 KRT18P6-201ENST00000555540 1265 ntBASIC20.78■□□□□ 0.92
ZNF542PQ5EBM4 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.78■□□□□ 0.92
ZNF542PQ5EBM4 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.78■□□□□ 0.92
ZNF542PQ5EBM4 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.78■□□□□ 0.92
ZNF542PQ5EBM4 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.78■□□□□ 0.92
ZNF542PQ5EBM4 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF542PQ5EBM4 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF542PQ5EBM4 AC026471.6-201ENST00000622954 1905 ntBASIC20.78■□□□□ 0.92
ZNF542PQ5EBM4 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF542PQ5EBM4 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF542PQ5EBM4 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ZNF542PQ5EBM4 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ZNF542PQ5EBM4 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ZNF542PQ5EBM4 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ZNF542PQ5EBM4 AC061975.6-201ENST00000579045 1553 ntBASIC20.77■□□□□ 0.92
ZNF542PQ5EBM4 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
ZNF542PQ5EBM4 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ZNF542PQ5EBM4 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ZNF542PQ5EBM4 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.77■□□□□ 0.92
ZNF542PQ5EBM4 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ZNF542PQ5EBM4 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ZNF542PQ5EBM4 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
ZNF542PQ5EBM4 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms