Protein–RNA interactions for Protein: Q52LA3

LIN52, Protein lin-52 homolog, humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN52Q52LA3 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
LIN52Q52LA3 AC087289.5-201ENST00000586076 3175 ntBASIC20.23■□□□□ 0.83
LIN52Q52LA3 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LIN52Q52LA3 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
LIN52Q52LA3 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.23■□□□□ 0.83
LIN52Q52LA3 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
LIN52Q52LA3 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LIN52Q52LA3 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
LIN52Q52LA3 EML3-217ENST00000531557 2509 ntTSL 5 BASIC20.23■□□□□ 0.83
LIN52Q52LA3 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LIN52Q52LA3 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
LIN52Q52LA3 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
LIN52Q52LA3 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
LIN52Q52LA3 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.22■□□□□ 0.83
LIN52Q52LA3 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LIN52Q52LA3 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.22■□□□□ 0.83
LIN52Q52LA3 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LIN52Q52LA3 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LIN52Q52LA3 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LIN52Q52LA3 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LIN52Q52LA3 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LIN52Q52LA3 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
LIN52Q52LA3 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
LIN52Q52LA3 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
LIN52Q52LA3 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LIN52Q52LA3 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LIN52Q52LA3 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.22■□□□□ 0.83
LIN52Q52LA3 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
LIN52Q52LA3 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LIN52Q52LA3 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.22■□□□□ 0.83
LIN52Q52LA3 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LIN52Q52LA3 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.21■□□□□ 0.83
LIN52Q52LA3 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
LIN52Q52LA3 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
LIN52Q52LA3 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LIN52Q52LA3 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LIN52Q52LA3 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.21■□□□□ 0.83
LIN52Q52LA3 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.21■□□□□ 0.83
LIN52Q52LA3 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
LIN52Q52LA3 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
LIN52Q52LA3 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
LIN52Q52LA3 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.21■□□□□ 0.83
LIN52Q52LA3 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
LIN52Q52LA3 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LIN52Q52LA3 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LIN52Q52LA3 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LIN52Q52LA3 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
LIN52Q52LA3 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LIN52Q52LA3 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LIN52Q52LA3 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.21■□□□□ 0.83
LIN52Q52LA3 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.21■□□□□ 0.83
LIN52Q52LA3 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LIN52Q52LA3 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LIN52Q52LA3 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC20.2■□□□□ 0.82
LIN52Q52LA3 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.2■□□□□ 0.82
LIN52Q52LA3 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
LIN52Q52LA3 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.2■□□□□ 0.82
LIN52Q52LA3 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
LIN52Q52LA3 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
LIN52Q52LA3 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.2■□□□□ 0.82
LIN52Q52LA3 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LIN52Q52LA3 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.2■□□□□ 0.82
LIN52Q52LA3 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
LIN52Q52LA3 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
LIN52Q52LA3 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LIN52Q52LA3 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LIN52Q52LA3 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LIN52Q52LA3 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.82
LIN52Q52LA3 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LIN52Q52LA3 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LIN52Q52LA3 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
LIN52Q52LA3 FEM1AP4-201ENST00000443167 1987 ntBASIC20.19■□□□□ 0.82
LIN52Q52LA3 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.19■□□□□ 0.82
LIN52Q52LA3 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.19■□□□□ 0.82
LIN52Q52LA3 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
LIN52Q52LA3 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LIN52Q52LA3 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.19■□□□□ 0.82
LIN52Q52LA3 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
LIN52Q52LA3 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.19■□□□□ 0.82
LIN52Q52LA3 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.18■□□□□ 0.82
LIN52Q52LA3 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
LIN52Q52LA3 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LIN52Q52LA3 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.18■□□□□ 0.82
LIN52Q52LA3 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LIN52Q52LA3 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LIN52Q52LA3 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
LIN52Q52LA3 AC006455.2-201ENST00000429931 906 ntBASIC20.18■□□□□ 0.82
LIN52Q52LA3 SRD5A1P1-201ENST00000442297 786 ntBASIC20.18■□□□□ 0.82
LIN52Q52LA3 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.18■□□□□ 0.82
LIN52Q52LA3 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.18■□□□□ 0.82
LIN52Q52LA3 pRNA.6-201ENST00000610482 90 ntBASIC20.18■□□□□ 0.82
LIN52Q52LA3 pRNA.5-201ENST00000612139 90 ntBASIC20.18■□□□□ 0.82
LIN52Q52LA3 pRNA.11-201ENST00000618423 90 ntBASIC20.18■□□□□ 0.82
LIN52Q52LA3 pRNA.13-201ENST00000619112 90 ntBASIC20.18■□□□□ 0.82
LIN52Q52LA3 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.18■□□□□ 0.82
LIN52Q52LA3 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
LIN52Q52LA3 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LIN52Q52LA3 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
LIN52Q52LA3 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.18■□□□□ 0.82
LIN52Q52LA3 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms