Protein–RNA interactions for Protein: Q3SXM0

DCAF4L1, DDB1- and CUL4-associated factor 4-like protein 1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCAF4L1Q3SXM0 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
DCAF4L1Q3SXM0 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
DCAF4L1Q3SXM0 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC23.04■■□□□ 1.28
DCAF4L1Q3SXM0 POU5F1P4-201ENST00000413175 1085 ntBASIC23.04■■□□□ 1.28
DCAF4L1Q3SXM0 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC23.04■■□□□ 1.28
DCAF4L1Q3SXM0 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC23.04■■□□□ 1.28
DCAF4L1Q3SXM0 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
DCAF4L1Q3SXM0 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
DCAF4L1Q3SXM0 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
DCAF4L1Q3SXM0 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
DCAF4L1Q3SXM0 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC23.04■■□□□ 1.28
DCAF4L1Q3SXM0 RARG-204ENST00000543726 1779 ntTSL 2 BASIC23.04■■□□□ 1.28
DCAF4L1Q3SXM0 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
DCAF4L1Q3SXM0 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC23.03■■□□□ 1.28
DCAF4L1Q3SXM0 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
DCAF4L1Q3SXM0 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
DCAF4L1Q3SXM0 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
DCAF4L1Q3SXM0 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC23.03■■□□□ 1.28
DCAF4L1Q3SXM0 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
DCAF4L1Q3SXM0 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC23.03■■□□□ 1.28
DCAF4L1Q3SXM0 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC23.03■■□□□ 1.28
DCAF4L1Q3SXM0 AC120498.10-201ENST00000621827 505 ntBASIC23.03■■□□□ 1.28
DCAF4L1Q3SXM0 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
DCAF4L1Q3SXM0 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
DCAF4L1Q3SXM0 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC23.03■■□□□ 1.28
DCAF4L1Q3SXM0 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
DCAF4L1Q3SXM0 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
DCAF4L1Q3SXM0 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC23.03■■□□□ 1.28
DCAF4L1Q3SXM0 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
DCAF4L1Q3SXM0 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC23.03■■□□□ 1.28
DCAF4L1Q3SXM0 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
DCAF4L1Q3SXM0 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
DCAF4L1Q3SXM0 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC23.02■■□□□ 1.28
DCAF4L1Q3SXM0 AC026471.6-201ENST00000622954 1905 ntBASIC23.02■■□□□ 1.28
DCAF4L1Q3SXM0 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
DCAF4L1Q3SXM0 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC23.02■■□□□ 1.28
DCAF4L1Q3SXM0 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
DCAF4L1Q3SXM0 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC23.02■■□□□ 1.28
DCAF4L1Q3SXM0 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC23.02■■□□□ 1.28
DCAF4L1Q3SXM0 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
DCAF4L1Q3SXM0 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
DCAF4L1Q3SXM0 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
DCAF4L1Q3SXM0 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC23.01■■□□□ 1.27
DCAF4L1Q3SXM0 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
DCAF4L1Q3SXM0 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
DCAF4L1Q3SXM0 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
DCAF4L1Q3SXM0 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
DCAF4L1Q3SXM0 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
DCAF4L1Q3SXM0 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
DCAF4L1Q3SXM0 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
DCAF4L1Q3SXM0 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
DCAF4L1Q3SXM0 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
DCAF4L1Q3SXM0 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC23.01■■□□□ 1.27
DCAF4L1Q3SXM0 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC23.01■■□□□ 1.27
DCAF4L1Q3SXM0 SLC7A5P2-201ENST00000553010 536 ntBASIC23.01■■□□□ 1.27
DCAF4L1Q3SXM0 DUX4L16-201ENST00000555130 1264 ntBASIC23.01■■□□□ 1.27
DCAF4L1Q3SXM0 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC23.01■■□□□ 1.27
DCAF4L1Q3SXM0 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC23.01■■□□□ 1.27
DCAF4L1Q3SXM0 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
DCAF4L1Q3SXM0 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC23.01■■□□□ 1.27
DCAF4L1Q3SXM0 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
DCAF4L1Q3SXM0 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC23.01■■□□□ 1.27
DCAF4L1Q3SXM0 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC23.01■■□□□ 1.27
DCAF4L1Q3SXM0 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC23.01■■□□□ 1.27
DCAF4L1Q3SXM0 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC23■■□□□ 1.27
DCAF4L1Q3SXM0 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC23■■□□□ 1.27
DCAF4L1Q3SXM0 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC23■■□□□ 1.27
DCAF4L1Q3SXM0 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
DCAF4L1Q3SXM0 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC23■■□□□ 1.27
DCAF4L1Q3SXM0 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC23■■□□□ 1.27
DCAF4L1Q3SXM0 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC23■■□□□ 1.27
DCAF4L1Q3SXM0 AC231657.2-201ENST00000624556 255 ntBASIC23■■□□□ 1.27
DCAF4L1Q3SXM0 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
DCAF4L1Q3SXM0 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
DCAF4L1Q3SXM0 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC23■■□□□ 1.27
DCAF4L1Q3SXM0 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
DCAF4L1Q3SXM0 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC22.99■■□□□ 1.27
DCAF4L1Q3SXM0 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
DCAF4L1Q3SXM0 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
DCAF4L1Q3SXM0 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
DCAF4L1Q3SXM0 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
DCAF4L1Q3SXM0 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
DCAF4L1Q3SXM0 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC22.99■■□□□ 1.27
DCAF4L1Q3SXM0 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC22.99■■□□□ 1.27
DCAF4L1Q3SXM0 AC010536.3-201ENST00000620306 533 ntBASIC22.99■■□□□ 1.27
DCAF4L1Q3SXM0 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC22.99■■□□□ 1.27
DCAF4L1Q3SXM0 AC010542.4-201ENST00000563151 1910 ntBASIC22.99■■□□□ 1.27
DCAF4L1Q3SXM0 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
DCAF4L1Q3SXM0 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
DCAF4L1Q3SXM0 ECEL1P1-201ENST00000373592 1742 ntBASIC22.99■■□□□ 1.27
DCAF4L1Q3SXM0 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
DCAF4L1Q3SXM0 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
DCAF4L1Q3SXM0 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC22.98■■□□□ 1.27
DCAF4L1Q3SXM0 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC22.98■■□□□ 1.27
DCAF4L1Q3SXM0 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC22.98■■□□□ 1.27
DCAF4L1Q3SXM0 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC22.98■■□□□ 1.27
DCAF4L1Q3SXM0 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
DCAF4L1Q3SXM0 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
DCAF4L1Q3SXM0 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
DCAF4L1Q3SXM0 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 10.5 ms