Protein–RNA interactions for Protein: Q06406

LSM6, U6 snRNA-associated Sm-like protein LSm6, yeastyeast

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM6Q06406 RPC11YDR045C 333 nt1.75□□□□□ -2.13
LSM6Q06406 RPL27BYDR471W 411 nt1.75□□□□□ -2.13
LSM6Q06406 BUR6YER159C 429 nt1.75□□□□□ -2.13
LSM6Q06406 AYR1YIL124W 894 nt1.75□□□□□ -2.13
LSM6Q06406 YIR043CYIR043C 693 nt1.75□□□□□ -2.13
LSM6Q06406 SFH5YJL145W 885 nt1.75□□□□□ -2.13
LSM6Q06406 YLL037WYLL037W 381 nt1.75□□□□□ -2.13
LSM6Q06406 YLL044WYLL044W 447 nt1.75□□□□□ -2.13
LSM6Q06406 YMR010WYMR010W 1218 nt1.75□□□□□ -2.13
LSM6Q06406 YOR082CYOR082C 342 nt1.75□□□□□ -2.13
LSM6Q06406 YOR097CYOR097C 528 nt1.75□□□□□ -2.13
LSM6Q06406 YPR136CYPR136C 513 nt1.75□□□□□ -2.13
LSM6Q06406 DSL1YNL258C 2265 nt1.75□□□□□ -2.13
LSM6Q06406 YPR148CYPR148C 1308 nt1.74□□□□□ -2.13
LSM6Q06406 PAM1YDR251W 2493 nt1.74□□□□□ -2.13
LSM6Q06406 MRP10YDL045W-A 288 nt1.74□□□□□ -2.13
LSM6Q06406 YGL262WYGL262W 528 nt1.74□□□□□ -2.13
LSM6Q06406 YIL054WYIL054W 318 nt1.74□□□□□ -2.13
LSM6Q06406 YMR310CYMR310C 954 nt1.74□□□□□ -2.13
LSM6Q06406 YNL203CYNL203C 612 nt1.74□□□□□ -2.13
LSM6Q06406 HUB1YNR032C-A 222 nt1.74□□□□□ -2.13
LSM6Q06406 AI2Q0055 2565 nt1.74□□□□□ -2.13
LSM6Q06406 YHR078WYHR078W 1659 nt1.74□□□□□ -2.13
LSM6Q06406 STE11YLR362W 2154 nt1.74□□□□□ -2.13
LSM6Q06406 RLI1YDR091C 1827 nt1.73□□□□□ -2.13
LSM6Q06406 KIN3YAR018C 1308 nt1.73□□□□□ -2.13
LSM6Q06406 KRE33YNL132W 3171 nt1.73□□□□□ -2.13
LSM6Q06406 THO1YER063W 657 nt1.73□□□□□ -2.13
LSM6Q06406 TIM21YGR033C 720 nt1.73□□□□□ -2.13
LSM6Q06406 YGR291CYGR291C 222 nt1.73□□□□□ -2.13
LSM6Q06406 YKR047WYKR047W 306 nt1.73□□□□□ -2.13
LSM6Q06406 YBL081WYBL081W 1107 nt1.73□□□□□ -2.13
LSM6Q06406 RPL25YOL127W 429 nt1.73□□□□□ -2.13
LSM6Q06406 ISU1YPL135W 498 nt1.73□□□□□ -2.13
LSM6Q06406 CBP6YBR120C 489 nt1.73□□□□□ -2.13
LSM6Q06406 YBR298C-AYBR298C-A 222 nt1.73□□□□□ -2.13
LSM6Q06406 SPP41YDR464W 4308 nt1.73□□□□□ -2.13
LSM6Q06406 YBT1YLL048C 4986 nt1.73□□□□□ -2.13
LSM6Q06406 YCK2YNL154C 1641 nt1.73□□□□□ -2.13
LSM6Q06406 SEC16YPL085W 6588 nt1.72□□□□□ -2.13
LSM6Q06406 ARH1YDR376W 1482 nt1.72□□□□□ -2.13
LSM6Q06406 TCD1YHR003C 1290 nt1.72□□□□□ -2.13
LSM6Q06406 YJR128WYJR128W 360 nt1.72□□□□□ -2.13
LSM6Q06406 RPS31YLR167W 459 nt1.72□□□□□ -2.13
LSM6Q06406 RPS1AYLR441C 768 nt1.72□□□□□ -2.13
LSM6Q06406 RSF1YMR030W 1131 nt1.72□□□□□ -2.13
LSM6Q06406 ERD2YBL040C 660 nt1.72□□□□□ -2.13
LSM6Q06406 YOL166CYOL166C 339 nt1.72□□□□□ -2.13
LSM6Q06406 SAP185YJL098W 3177 nt1.72□□□□□ -2.13
LSM6Q06406 YIG1YPL201C 1386 nt1.72□□□□□ -2.13
LSM6Q06406 YDL199CYDL199C 2064 nt1.71□□□□□ -2.13
LSM6Q06406 YCG1YDR325W 3108 nt1.71□□□□□ -2.14
LSM6Q06406 PCL10YGL134W 1302 nt1.71□□□□□ -2.14
LSM6Q06406 YCR064CYCR064C 411 nt1.71□□□□□ -2.14
LSM6Q06406 GRX2YDR513W 432 nt1.71□□□□□ -2.14
LSM6Q06406 SDT1YGL224C 843 nt1.71□□□□□ -2.14
LSM6Q06406 MRPL49YJL096W 486 nt1.71□□□□□ -2.14
LSM6Q06406 GAT3YLR013W 426 nt1.71□□□□□ -2.14
LSM6Q06406 AIM32YML050W 936 nt1.71□□□□□ -2.14
LSM6Q06406 YDR186CYDR186C 2634 nt1.71□□□□□ -2.14
LSM6Q06406 SCD5YOR329C 2619 nt1.71□□□□□ -2.14
LSM6Q06406 TAE2YPL009C 3117 nt1.71□□□□□ -2.14
LSM6Q06406 SPH1YLR313C 1593 nt1.71□□□□□ -2.14
LSM6Q06406 MNT3YIL014W 1893 nt1.71□□□□□ -2.14
LSM6Q06406 RKM4YDR257C 1485 nt1.7□□□□□ -2.14
LSM6Q06406 CTM1YHR109W 1758 nt1.7□□□□□ -2.14
LSM6Q06406 AVT2YEL064C 1443 nt1.7□□□□□ -2.14
LSM6Q06406 YHR213WYHR213W 597 nt1.7□□□□□ -2.14
LSM6Q06406 VMA5YKL080W 1179 nt1.7□□□□□ -2.14
LSM6Q06406 TPO5YKL174C 1857 nt1.7□□□□□ -2.14
LSM6Q06406 YAL059C-AYAL059C-A 423 nt1.7□□□□□ -2.14
LSM6Q06406 DAD2YKR083C 402 nt1.7□□□□□ -2.14
LSM6Q06406 PAU23YLR037C 375 nt1.7□□□□□ -2.14
LSM6Q06406 YAR062WYAR062W 597 nt1.7□□□□□ -2.14
LSM6Q06406 FKH2YNL068C 2589 nt1.7□□□□□ -2.14
LSM6Q06406 GAT2YMR136W 1683 nt1.7□□□□□ -2.14
LSM6Q06406 RNY1YPL123C 1305 nt1.69□□□□□ -2.14
LSM6Q06406 TOR2YKL203C 7425 nt1.69□□□□□ -2.14
LSM6Q06406 NMA111YNL123W 2994 nt1.69□□□□□ -2.14
LSM6Q06406 MED2YDL005C 1296 nt1.69□□□□□ -2.14
LSM6Q06406 AIM11YER093C-A 414 nt1.69□□□□□ -2.14
LSM6Q06406 SCL1YGL011C 759 nt1.69□□□□□ -2.14
LSM6Q06406 TYS1YGR185C 1185 nt1.69□□□□□ -2.14
LSM6Q06406 PCL7YIL050W 858 nt1.69□□□□□ -2.14
LSM6Q06406 CPR3YML078W 549 nt1.69□□□□□ -2.14
LSM6Q06406 MSN1YOL116W 1149 nt1.69□□□□□ -2.14
LSM6Q06406 PNT1YOR266W 1272 nt1.69□□□□□ -2.14
LSM6Q06406 FBP26YJL155C 1359 nt1.69□□□□□ -2.14
LSM6Q06406 USO1YDL058W 5373 nt1.68□□□□□ -2.14
LSM6Q06406 TAF2YCR042C 4224 nt1.68□□□□□ -2.14
LSM6Q06406 BSC1YDL037C 987 nt1.68□□□□□ -2.14
LSM6Q06406 YDR535CYDR535C 501 nt1.68□□□□□ -2.14
LSM6Q06406 HMF1YER057C 390 nt1.68□□□□□ -2.14
LSM6Q06406 CGR1YGL029W 363 nt1.68□□□□□ -2.14
LSM6Q06406 OTU2YHL013C 924 nt1.68□□□□□ -2.14
LSM6Q06406 YNL184CYNL184C 327 nt1.68□□□□□ -2.14
LSM6Q06406 ARO7YPR060C 771 nt1.68□□□□□ -2.14
LSM6Q06406 VIP1YLR410W 3441 nt1.68□□□□□ -2.14
LSM6Q06406 UBX3YDL091C 1368 nt1.68□□□□□ -2.14
LSM6Q06406 UBP2YOR124C 3819 nt1.68□□□□□ -2.14
Retrieved 100 of 7,029 protein–RNA pairs in 21.2 ms