Protein–RNA interactions for Protein: P54852

EMP3, Epithelial membrane protein 3, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EMP3P54852 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC20.52■□□□□ 0.88
EMP3P54852 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
EMP3P54852 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.52■□□□□ 0.88
EMP3P54852 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
EMP3P54852 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.87
EMP3P54852 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
EMP3P54852 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
EMP3P54852 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
EMP3P54852 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.51■□□□□ 0.87
EMP3P54852 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.51■□□□□ 0.87
EMP3P54852 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
EMP3P54852 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
EMP3P54852 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC20.51■□□□□ 0.87
EMP3P54852 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
EMP3P54852 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.51■□□□□ 0.87
EMP3P54852 CCDC92B-201ENST00000575506 885 ntBASIC20.51■□□□□ 0.87
EMP3P54852 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.51■□□□□ 0.87
EMP3P54852 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
EMP3P54852 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
EMP3P54852 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
EMP3P54852 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
EMP3P54852 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.51■□□□□ 0.87
EMP3P54852 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
EMP3P54852 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
EMP3P54852 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
EMP3P54852 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.51■□□□□ 0.87
EMP3P54852 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
EMP3P54852 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
EMP3P54852 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
EMP3P54852 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
EMP3P54852 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
EMP3P54852 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.5■□□□□ 0.87
EMP3P54852 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.5■□□□□ 0.87
EMP3P54852 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
EMP3P54852 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
EMP3P54852 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
EMP3P54852 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
EMP3P54852 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.5■□□□□ 0.87
EMP3P54852 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
EMP3P54852 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20.5■□□□□ 0.87
EMP3P54852 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
EMP3P54852 AC007952.6-201ENST00000573168 2673 ntBASIC20.5■□□□□ 0.87
EMP3P54852 AC003957.1-201ENST00000625108 2673 ntBASIC20.5■□□□□ 0.87
EMP3P54852 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
EMP3P54852 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
EMP3P54852 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
EMP3P54852 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
EMP3P54852 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.49■□□□□ 0.87
EMP3P54852 KRT18P14-201ENST00000534205 1250 ntBASIC20.49■□□□□ 0.87
EMP3P54852 DUX4L2-201ENST00000561772 1275 ntBASIC20.49■□□□□ 0.87
EMP3P54852 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC20.49■□□□□ 0.87
EMP3P54852 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC20.49■□□□□ 0.87
EMP3P54852 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
EMP3P54852 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.49■□□□□ 0.87
EMP3P54852 ANKRD20A6P-201ENST00000618763 204 ntBASIC20.49■□□□□ 0.87
EMP3P54852 DUX4L6-201ENST00000626483 1275 ntBASIC20.49■□□□□ 0.87
EMP3P54852 DUX4L1-201ENST00000627662 1275 ntBASIC20.49■□□□□ 0.87
EMP3P54852 DUX4L8-201ENST00000629013 1275 ntBASIC20.49■□□□□ 0.87
EMP3P54852 DUX4L3-201ENST00000630187 1275 ntBASIC20.49■□□□□ 0.87
EMP3P54852 DUX4L7-201ENST00000630678 1275 ntBASIC20.49■□□□□ 0.87
EMP3P54852 DUX4L5-201ENST00000630834 1275 ntBASIC20.49■□□□□ 0.87
EMP3P54852 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
EMP3P54852 AF106564.1-201ENST00000607058 2553 ntBASIC20.49■□□□□ 0.87
EMP3P54852 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
EMP3P54852 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
EMP3P54852 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
EMP3P54852 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.48■□□□□ 0.87
EMP3P54852 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
EMP3P54852 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
EMP3P54852 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.48■□□□□ 0.87
EMP3P54852 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
EMP3P54852 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.48■□□□□ 0.87
EMP3P54852 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.48■□□□□ 0.87
EMP3P54852 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
EMP3P54852 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.48■□□□□ 0.87
EMP3P54852 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
EMP3P54852 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.48■□□□□ 0.87
EMP3P54852 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.48■□□□□ 0.87
EMP3P54852 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
EMP3P54852 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
EMP3P54852 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
EMP3P54852 AC242852.2-201ENST00000615738 1807 ntBASIC20.48■□□□□ 0.87
EMP3P54852 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
EMP3P54852 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.47■□□□□ 0.87
EMP3P54852 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
EMP3P54852 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
EMP3P54852 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
EMP3P54852 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
EMP3P54852 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC20.47■□□□□ 0.87
EMP3P54852 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
EMP3P54852 FBXW4P1-201ENST00000426721 2239 ntBASIC20.47■□□□□ 0.87
EMP3P54852 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
EMP3P54852 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
EMP3P54852 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
EMP3P54852 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
EMP3P54852 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
EMP3P54852 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
EMP3P54852 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
EMP3P54852 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
EMP3P54852 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms