Protein–RNA interactions for Protein: P53538

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, yeastyeast

Predicted RBP Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSU72P53538 ACA1YER045C 1470 nt2.61□□□□□ -1.99
SSU72P53538 ARP4YJL081C 1470 nt2.61□□□□□ -1.99
SSU72P53538 MSS4YDR208W 2340 nt2.61□□□□□ -1.99
SSU72P53538 PPE1YHR075C 1203 nt2.61□□□□□ -1.99
SSU72P53538 PCL7YIL050W 858 nt2.61□□□□□ -1.99
SSU72P53538 VMA5YKL080W 1179 nt2.61□□□□□ -1.99
SSU72P53538 USB1YLR132C 873 nt2.61□□□□□ -1.99
SSU72P53538 SEC14YMR079W 915 nt2.61□□□□□ -1.99
SSU72P53538 YOR365CYOR365C 2112 nt2.61□□□□□ -1.99
SSU72P53538 LDH1YBR204C 1128 nt2.61□□□□□ -1.99
SSU72P53538 RRP14YKL082C 1305 nt2.61□□□□□ -1.99
SSU72P53538 TRM12YML005W 1389 nt2.61□□□□□ -1.99
SSU72P53538 CBP2YHL038C 1893 nt2.6□□□□□ -1.99
SSU72P53538 TPO5YKL174C 1857 nt2.6□□□□□ -1.99
SSU72P53538 STE6YKL209C 3873 nt2.6□□□□□ -1.99
SSU72P53538 YCR024C-BYCR024C-B 267 nt2.6□□□□□ -1.99
SSU72P53538 YFL051CYFL051C 483 nt2.6□□□□□ -1.99
SSU72P53538 YHR214C-DYHR214C-D 294 nt2.6□□□□□ -1.99
SSU72P53538 YJR128WYJR128W 360 nt2.6□□□□□ -1.99
SSU72P53538 YAR069CYAR069C 294 nt2.6□□□□□ -1.99
SSU72P53538 YOR263CYOR263C 408 nt2.6□□□□□ -1.99
SSU72P53538 YPR074W-AYPR074W-A 171 nt2.6□□□□□ -1.99
SSU72P53538 YCG1YDR325W 3108 nt2.6□□□□□ -1.99
SSU72P53538 CHS2YBR038W 2892 nt2.6□□□□□ -1.99
SSU72P53538 RPN4YDL020C 1596 nt2.6□□□□□ -1.99
SSU72P53538 NUF2YOL069W 1356 nt2.6□□□□□ -1.99
SSU72P53538 MET10YFR030W 3108 nt2.59□□□□□ -1.99
SSU72P53538 KIN82YCR091W 2163 nt2.59□□□□□ -1.99
SSU72P53538 VTC4YJL012C 2166 nt2.59□□□□□ -1.99
SSU72P53538 AIM11YER093C-A 414 nt2.59□□□□□ -1.99
SSU72P53538 ISC10YER180C 804 nt2.59□□□□□ -1.99
SSU72P53538 PNC1YGL037C 651 nt2.59□□□□□ -1.99
SSU72P53538 RPL27AYHR010W 411 nt2.59□□□□□ -1.99
SSU72P53538 ATG16YMR159C 453 nt2.59□□□□□ -1.99
SSU72P53538 RPN8YOR261C 1017 nt2.59□□□□□ -1.99
SSU72P53538 NIP7YPL211W 546 nt2.59□□□□□ -1.99
SSU72P53538 UBS1YBR165W 834 nt2.59□□□□□ -1.99
SSU72P53538 HFM1YGL251C 3564 nt2.59□□□□□ -1.99
SSU72P53538 BPT1YLL015W 4680 nt2.59□□□□□ -2
SSU72P53538 NFT1YKR103W 3657 nt2.59□□□□□ -2
SSU72P53538 ECM18YDR125C 1362 nt2.59□□□□□ -2
SSU72P53538 YDL199CYDL199C 2064 nt2.59□□□□□ -2
SSU72P53538 CEX1YOR112W 2286 nt2.58□□□□□ -2
SSU72P53538 SHQ1YIL104C 1524 nt2.58□□□□□ -2
SSU72P53538 PBI1YPL272C 1554 nt2.58□□□□□ -2
SSU72P53538 YDR239CYDR239C 2364 nt2.58□□□□□ -2
SSU72P53538 NOP4YPL043W 2058 nt2.58□□□□□ -2
SSU72P53538 RPL35BYDL136W 363 nt2.58□□□□□ -2
SSU72P53538 APA2YDR530C 978 nt2.58□□□□□ -2
SSU72P53538 RPL30YGL030W 318 nt2.58□□□□□ -2
SSU72P53538 CFD1YIL003W 882 nt2.58□□□□□ -2
SSU72P53538 SAW1YAL027W 786 nt2.58□□□□□ -2
SSU72P53538 YLR076CYLR076C 423 nt2.58□□□□□ -2
SSU72P53538 YMR310CYMR310C 954 nt2.58□□□□□ -2
SSU72P53538 IZH4YOL101C 939 nt2.58□□□□□ -2
SSU72P53538 CAF20YOR276W 486 nt2.58□□□□□ -2
SSU72P53538 SPP381YBR152W 876 nt2.58□□□□□ -2
SSU72P53538 CMK1YFR014C 1341 nt2.58□□□□□ -2
SSU72P53538 PCI8YIL071C 1335 nt2.58□□□□□ -2
SSU72P53538 ITT1YML068W 1395 nt2.58□□□□□ -2
SSU72P53538 ISW1YBR245C 3390 nt2.58□□□□□ -2
SSU72P53538 HFD1YMR110C 1599 nt2.57□□□□□ -2
SSU72P53538 YCK2YNL154C 1641 nt2.57□□□□□ -2
SSU72P53538 VIP1YLR410W 3441 nt2.57□□□□□ -2
SSU72P53538 YER066C-AYER066C-A 501 nt2.57□□□□□ -2
SSU72P53538 YGR168CYGR168C 1131 nt2.57□□□□□ -2
SSU72P53538 YIL102C-AYIL102C-A 228 nt2.57□□□□□ -2
SSU72P53538 RSM26YJR101W 801 nt2.57□□□□□ -2
SSU72P53538 HOT13YKL084W 351 nt2.57□□□□□ -2
SSU72P53538 YMR294W-AYMR294W-A 360 nt2.57□□□□□ -2
SSU72P53538 YNL171CYNL171C 369 nt2.57□□□□□ -2
SSU72P53538 COS1YNL336W 1146 nt2.57□□□□□ -2
SSU72P53538 PFK27YOL136C 1194 nt2.57□□□□□ -2
SSU72P53538 BAG7YOR134W 1230 nt2.57□□□□□ -2
SSU72P53538 SYC1YOR179C 567 nt2.57□□□□□ -2
SSU72P53538 RPL20BYOR312C 519 nt2.57□□□□□ -2
SSU72P53538 PSY4YBL046W 1326 nt2.57□□□□□ -2
SSU72P53538 PIN4YBL051C 2007 nt2.57□□□□□ -2
SSU72P53538 PLM2YDR501W 1566 nt2.57□□□□□ -2
SSU72P53538 SUL1YBR294W 2580 nt2.56□□□□□ -2
SSU72P53538 NTO1YPR031W 2247 nt2.56□□□□□ -2
SSU72P53538 CDC26YFR036W 375 nt2.56□□□□□ -2
SSU72P53538 DOG2YHR043C 741 nt2.56□□□□□ -2
SSU72P53538 PAN5YHR063C 1140 nt2.56□□□□□ -2
SSU72P53538 YJR071WYJR071W 369 nt2.56□□□□□ -2
SSU72P53538 YKL156C-AYKL156C-A 117 nt2.56□□□□□ -2
SSU72P53538 DAD2YKR083C 402 nt2.56□□□□□ -2
SSU72P53538 YML047W-AYML047W-A 366 nt2.56□□□□□ -2
SSU72P53538 YNL203CYNL203C 612 nt2.56□□□□□ -2
SSU72P53538 ATG5YPL149W 885 nt2.56□□□□□ -2
SSU72P53538 ATG29YPL166W 642 nt2.56□□□□□ -2
SSU72P53538 MRP2YPR166C 348 nt2.56□□□□□ -2
SSU72P53538 SOK1YDR006C 2706 nt2.56□□□□□ -2
SSU72P53538 CDC40YDR364C 1368 nt2.56□□□□□ -2
SSU72P53538 VHR2YER064C 1518 nt2.56□□□□□ -2
SSU72P53538 YKL100CYKL100C 1764 nt2.56□□□□□ -2
SSU72P53538 DRS2YAL026C 4068 nt2.56□□□□□ -2
SSU72P53538 GYL1YMR192W 2163 nt2.56□□□□□ -2
SSU72P53538 YDR355CYDR355C 303 nt2.55□□□□□ -2
SSU72P53538 YHR022CYHR022C 771 nt2.55□□□□□ -2
Retrieved 100 of 7,029 protein–RNA pairs in 30.4 ms