Protein–RNA interactions for Protein: P25054

APC, Adenomatous polyposis coli protein, humanhuman

Predictions only

Length 2,843 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APCP25054 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
APCP25054 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
APCP25054 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
APCP25054 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
APCP25054 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
APCP25054 RNF146-206ENST00000480444 843 ntTSL 2 BASIC18.12■□□□□ 0.49
APCP25054 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.12■□□□□ 0.49
APCP25054 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC18.12■□□□□ 0.49
APCP25054 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC18.12■□□□□ 0.49
APCP25054 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
APCP25054 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
APCP25054 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.12■□□□□ 0.49
APCP25054 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.12■□□□□ 0.49
APCP25054 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.12■□□□□ 0.49
APCP25054 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.12■□□□□ 0.49
APCP25054 AC133561.5-201ENST00000635547 218 ntBASIC18.12■□□□□ 0.49
APCP25054 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.11■□□□□ 0.49
APCP25054 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
APCP25054 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC18.11■□□□□ 0.49
APCP25054 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC18.11■□□□□ 0.49
APCP25054 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
APCP25054 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.11■□□□□ 0.49
APCP25054 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
APCP25054 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
APCP25054 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
APCP25054 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
APCP25054 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
APCP25054 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
APCP25054 KRT17P1-201ENST00000399211 1546 ntBASIC18.11■□□□□ 0.49
APCP25054 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
APCP25054 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC18.11■□□□□ 0.49
APCP25054 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
APCP25054 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
APCP25054 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
APCP25054 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
APCP25054 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18.1■□□□□ 0.49
APCP25054 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
APCP25054 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
APCP25054 AL355075.4-201ENST00000554988 638 ntBASIC18.1■□□□□ 0.49
APCP25054 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC18.1■□□□□ 0.49
APCP25054 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC18.1■□□□□ 0.49
APCP25054 CD177P1-201ENST00000606252 935 ntBASIC18.1■□□□□ 0.49
APCP25054 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.1■□□□□ 0.49
APCP25054 KRT17P2-201ENST00000300992 1314 ntBASIC18.1■□□□□ 0.49
APCP25054 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
APCP25054 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
APCP25054 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
APCP25054 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
APCP25054 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
APCP25054 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
APCP25054 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
APCP25054 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.1■□□□□ 0.49
APCP25054 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
APCP25054 AC092865.7-201ENST00000641832 219 ntBASIC18.1■□□□□ 0.49
APCP25054 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
APCP25054 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
APCP25054 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
APCP25054 AP003733.4-201ENST00000623785 1697 ntBASIC18.09■□□□□ 0.49
APCP25054 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
APCP25054 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.09■□□□□ 0.49
APCP25054 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
APCP25054 AC087499.1-201ENST00000418141 1075 ntBASIC18.09■□□□□ 0.49
APCP25054 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
APCP25054 TSPY7P-201ENST00000431358 1114 ntBASIC18.09■□□□□ 0.49
APCP25054 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC18.09■□□□□ 0.49
APCP25054 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC18.09■□□□□ 0.49
APCP25054 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC18.09■□□□□ 0.49
APCP25054 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC18.09■□□□□ 0.49
APCP25054 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
APCP25054 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
APCP25054 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
APCP25054 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC18.09■□□□□ 0.49
APCP25054 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
APCP25054 POU5F1P4-201ENST00000413175 1085 ntBASIC18.08■□□□□ 0.49
APCP25054 HLA-B-256ENST00000639848 1089 ntBASIC18.08■□□□□ 0.49
APCP25054 KRT16P2-201ENST00000414673 1423 ntBASIC18.08■□□□□ 0.49
APCP25054 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
APCP25054 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
APCP25054 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
APCP25054 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.08■□□□□ 0.48
APCP25054 TSPY15P-201ENST00000457163 923 ntBASIC18.08■□□□□ 0.48
APCP25054 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.08■□□□□ 0.48
APCP25054 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.08■□□□□ 0.48
APCP25054 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.08■□□□□ 0.48
APCP25054 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.48
APCP25054 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
APCP25054 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
APCP25054 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
APCP25054 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.08■□□□□ 0.48
APCP25054 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC18.08■□□□□ 0.48
APCP25054 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
APCP25054 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC18.08■□□□□ 0.48
APCP25054 KRT17P3-201ENST00000420566 1262 ntBASIC18.07■□□□□ 0.48
APCP25054 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.07■□□□□ 0.48
APCP25054 DHDH-203ENST00000522614 776 ntTSL 5 BASIC18.07■□□□□ 0.48
APCP25054 FGF8-207ENST00000618991 856 ntTSL 3 BASIC18.07■□□□□ 0.48
APCP25054 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
APCP25054 AP004607.7-201ENST00000527152 1677 ntBASIC18.07■□□□□ 0.48
APCP25054 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
APCP25054 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms