Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
MMP11P24347 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
MMP11P24347 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.14■□□□□ 0.81
MMP11P24347 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
MMP11P24347 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.14■□□□□ 0.81
MMP11P24347 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.14■□□□□ 0.81
MMP11P24347 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.14■□□□□ 0.81
MMP11P24347 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
MMP11P24347 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
MMP11P24347 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
MMP11P24347 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
MMP11P24347 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
MMP11P24347 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
MMP11P24347 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
MMP11P24347 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
MMP11P24347 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
MMP11P24347 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
MMP11P24347 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
MMP11P24347 KRT18P11-201ENST00000435214 1283 ntBASIC20.13■□□□□ 0.81
MMP11P24347 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC20.13■□□□□ 0.81
MMP11P24347 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.13■□□□□ 0.81
MMP11P24347 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
MMP11P24347 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.13■□□□□ 0.81
MMP11P24347 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.13■□□□□ 0.81
MMP11P24347 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
MMP11P24347 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.13■□□□□ 0.81
MMP11P24347 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
MMP11P24347 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
MMP11P24347 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
MMP11P24347 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.12■□□□□ 0.81
MMP11P24347 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.12■□□□□ 0.81
MMP11P24347 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
MMP11P24347 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.12■□□□□ 0.81
MMP11P24347 OR7E47P-201ENST00000546390 1422 ntBASIC20.12■□□□□ 0.81
MMP11P24347 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
MMP11P24347 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
MMP11P24347 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.12■□□□□ 0.81
MMP11P24347 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
MMP11P24347 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
MMP11P24347 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.12■□□□□ 0.81
MMP11P24347 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
MMP11P24347 BID-214ENST00000617586 542 ntTSL 5 BASIC20.12■□□□□ 0.81
MMP11P24347 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
MMP11P24347 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
MMP11P24347 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
MMP11P24347 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
MMP11P24347 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
MMP11P24347 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
MMP11P24347 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
MMP11P24347 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.11■□□□□ 0.81
MMP11P24347 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
MMP11P24347 FBXW4P1-201ENST00000426721 2239 ntBASIC20.11■□□□□ 0.81
MMP11P24347 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
MMP11P24347 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
MMP11P24347 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
MMP11P24347 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
MMP11P24347 AC055733.4-201ENST00000638462 1354 ntBASIC20.1■□□□□ 0.81
MMP11P24347 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.1■□□□□ 0.81
MMP11P24347 AP004607.7-201ENST00000527152 1677 ntBASIC20.1■□□□□ 0.81
MMP11P24347 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
MMP11P24347 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
MMP11P24347 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
MMP11P24347 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
MMP11P24347 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
MMP11P24347 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
MMP11P24347 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.1■□□□□ 0.81
MMP11P24347 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
MMP11P24347 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
MMP11P24347 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
MMP11P24347 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
MMP11P24347 AL034346.1-201ENST00000568244 1277 ntBASIC20.1■□□□□ 0.81
MMP11P24347 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.1■□□□□ 0.81
MMP11P24347 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
MMP11P24347 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
MMP11P24347 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.09■□□□□ 0.81
MMP11P24347 AL137060.1-201ENST00000618151 2648 ntBASIC20.09■□□□□ 0.81
MMP11P24347 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.09■□□□□ 0.81
MMP11P24347 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.09■□□□□ 0.81
MMP11P24347 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
MMP11P24347 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
MMP11P24347 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
MMP11P24347 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
MMP11P24347 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.09■□□□□ 0.81
MMP11P24347 AC104187.1-201ENST00000607510 612 ntBASIC20.09■□□□□ 0.81
MMP11P24347 AC073111.5-205ENST00000641717 521 ntBASIC20.09■□□□□ 0.81
MMP11P24347 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.09■□□□□ 0.81
MMP11P24347 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
MMP11P24347 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
MMP11P24347 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
MMP11P24347 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
MMP11P24347 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
MMP11P24347 ID1-201ENST00000376105 1233 ntBASIC20.08■□□□□ 0.81
MMP11P24347 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
MMP11P24347 CDCA4P2-201ENST00000441182 718 ntBASIC20.08■□□□□ 0.81
MMP11P24347 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC20.08■□□□□ 0.81
MMP11P24347 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC20.08■□□□□ 0.81
MMP11P24347 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.08■□□□□ 0.81
MMP11P24347 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.08■□□□□ 0.81
MMP11P24347 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.08■□□□□ 0.8
MMP11P24347 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms