Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC20.68■□□□□ 0.9
CDH3P22223 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.68■□□□□ 0.9
CDH3P22223 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.68■□□□□ 0.9
CDH3P22223 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.68■□□□□ 0.9
CDH3P22223 IKBKGP1-201ENST00000612193 1073 ntBASIC20.68■□□□□ 0.9
CDH3P22223 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDH3P22223 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
CDH3P22223 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CDH3P22223 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDH3P22223 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDH3P22223 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CDH3P22223 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDH3P22223 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDH3P22223 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.67■□□□□ 0.9
CDH3P22223 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CDH3P22223 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC20.67■□□□□ 0.9
CDH3P22223 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.67■□□□□ 0.9
CDH3P22223 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC20.67■□□□□ 0.9
CDH3P22223 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.67■□□□□ 0.9
CDH3P22223 AL137784.2-201ENST00000607332 1000 ntBASIC20.67■□□□□ 0.9
CDH3P22223 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC20.67■□□□□ 0.9
CDH3P22223 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDH3P22223 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDH3P22223 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDH3P22223 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CDH3P22223 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDH3P22223 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.67■□□□□ 0.9
CDH3P22223 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CDH3P22223 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CDH3P22223 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDH3P22223 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
CDH3P22223 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDH3P22223 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.66■□□□□ 0.9
CDH3P22223 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.66■□□□□ 0.9
CDH3P22223 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.66■□□□□ 0.9
CDH3P22223 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.66■□□□□ 0.9
CDH3P22223 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.66■□□□□ 0.9
CDH3P22223 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.66■□□□□ 0.9
CDH3P22223 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CDH3P22223 AC004854.2-201ENST00000608450 1441 ntBASIC20.66■□□□□ 0.9
CDH3P22223 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDH3P22223 ESRRAP2-201ENST00000418437 1549 ntBASIC20.66■□□□□ 0.9
CDH3P22223 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.66■□□□□ 0.9
CDH3P22223 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDH3P22223 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
CDH3P22223 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.66■□□□□ 0.9
CDH3P22223 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.66■□□□□ 0.9
CDH3P22223 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDH3P22223 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CDH3P22223 AC139530.1-201ENST00000575312 1977 ntBASIC20.66■□□□□ 0.9
CDH3P22223 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.66■□□□□ 0.9
CDH3P22223 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDH3P22223 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDH3P22223 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CDH3P22223 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CDH3P22223 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
CDH3P22223 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CDH3P22223 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.65■□□□□ 0.9
CDH3P22223 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CDH3P22223 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDH3P22223 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDH3P22223 AP004607.4-201ENST00000530158 1459 ntBASIC20.65■□□□□ 0.9
CDH3P22223 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC20.65■□□□□ 0.9
CDH3P22223 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.65■□□□□ 0.9
CDH3P22223 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC20.65■□□□□ 0.9
CDH3P22223 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CDH3P22223 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDH3P22223 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDH3P22223 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDH3P22223 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDH3P22223 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CDH3P22223 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDH3P22223 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
CDH3P22223 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
CDH3P22223 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CDH3P22223 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CDH3P22223 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CDH3P22223 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CDH3P22223 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.64■□□□□ 0.89
CDH3P22223 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.64■□□□□ 0.89
CDH3P22223 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
CDH3P22223 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.63■□□□□ 0.89
CDH3P22223 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.63■□□□□ 0.89
CDH3P22223 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CDH3P22223 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDH3P22223 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDH3P22223 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
CDH3P22223 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC20.63■□□□□ 0.89
CDH3P22223 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.63■□□□□ 0.89
CDH3P22223 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC20.63■□□□□ 0.89
CDH3P22223 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDH3P22223 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDH3P22223 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDH3P22223 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CDH3P22223 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
CDH3P22223 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDH3P22223 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CDH3P22223 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDH3P22223 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CDH3P22223 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms