Protein–RNA interactions for Protein: P19397

CD53, Leukocyte surface antigen CD53, humanhuman

Predictions only

Length 219 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD53P19397 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.2■□□□□ 0.66
CD53P19397 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CD53P19397 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CD53P19397 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CD53P19397 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CD53P19397 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CD53P19397 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CD53P19397 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CD53P19397 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CD53P19397 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
CD53P19397 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.19■□□□□ 0.66
CD53P19397 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.19■□□□□ 0.66
CD53P19397 MIR572-201ENST00000384983 95 ntBASIC19.19■□□□□ 0.66
CD53P19397 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.19■□□□□ 0.66
CD53P19397 IGHV3-19-201ENST00000521488 291 ntBASIC19.19■□□□□ 0.66
CD53P19397 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CD53P19397 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.19■□□□□ 0.66
CD53P19397 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.19■□□□□ 0.66
CD53P19397 MIR6084-201ENST00000622012 110 ntBASIC19.19■□□□□ 0.66
CD53P19397 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.19■□□□□ 0.66
CD53P19397 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.19■□□□□ 0.66
CD53P19397 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CD53P19397 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CD53P19397 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.19■□□□□ 0.66
CD53P19397 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CD53P19397 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CD53P19397 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CD53P19397 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CD53P19397 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CD53P19397 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.18■□□□□ 0.66
CD53P19397 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
CD53P19397 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CD53P19397 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CD53P19397 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CD53P19397 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
CD53P19397 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
CD53P19397 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.18■□□□□ 0.66
CD53P19397 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.18■□□□□ 0.66
CD53P19397 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.18■□□□□ 0.66
CD53P19397 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CD53P19397 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CD53P19397 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CD53P19397 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CD53P19397 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CD53P19397 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.17■□□□□ 0.66
CD53P19397 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
CD53P19397 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CD53P19397 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CD53P19397 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.17■□□□□ 0.66
CD53P19397 ID1-201ENST00000376105 1233 ntBASIC19.17■□□□□ 0.66
CD53P19397 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.17■□□□□ 0.66
CD53P19397 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.17■□□□□ 0.66
CD53P19397 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.17■□□□□ 0.66
CD53P19397 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.17■□□□□ 0.66
CD53P19397 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CD53P19397 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC19.17■□□□□ 0.66
CD53P19397 AC012414.1-201ENST00000556676 535 ntBASIC19.17■□□□□ 0.66
CD53P19397 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.17■□□□□ 0.66
CD53P19397 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CD53P19397 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CD53P19397 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CD53P19397 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
CD53P19397 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
CD53P19397 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.17■□□□□ 0.66
CD53P19397 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CD53P19397 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CD53P19397 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CD53P19397 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CD53P19397 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
CD53P19397 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CD53P19397 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CD53P19397 Z98882.1-201ENST00000622160 2253 ntBASIC19.16■□□□□ 0.66
CD53P19397 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CD53P19397 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CD53P19397 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CD53P19397 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.16■□□□□ 0.66
CD53P19397 CCDC92B-201ENST00000575506 885 ntBASIC19.16■□□□□ 0.66
CD53P19397 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CD53P19397 AL354811.1-201ENST00000610286 706 ntBASIC19.16■□□□□ 0.66
CD53P19397 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.16■□□□□ 0.66
CD53P19397 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CD53P19397 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CD53P19397 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CD53P19397 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
CD53P19397 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CD53P19397 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CD53P19397 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.15■□□□□ 0.66
CD53P19397 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CD53P19397 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CD53P19397 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.15■□□□□ 0.66
CD53P19397 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.15■□□□□ 0.66
CD53P19397 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
CD53P19397 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CD53P19397 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CD53P19397 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CD53P19397 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CD53P19397 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CD53P19397 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CD53P19397 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CD53P19397 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms