Protein–RNA interactions for Protein: P14651

HOXB3, Homeobox protein Hox-B3, humanhuman

Predicted RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3P14651 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
HOXB3P14651 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HOXB3P14651 GUSBP5-202ENST00000510805 1989 ntBASIC20.76■□□□□ 0.91
HOXB3P14651 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.75■□□□□ 0.91
HOXB3P14651 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.75■□□□□ 0.91
HOXB3P14651 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
HOXB3P14651 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.75■□□□□ 0.91
HOXB3P14651 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
HOXB3P14651 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HOXB3P14651 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
HOXB3P14651 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HOXB3P14651 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
HOXB3P14651 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.75■□□□□ 0.91
HOXB3P14651 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
HOXB3P14651 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HOXB3P14651 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC20.75■□□□□ 0.91
HOXB3P14651 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HOXB3P14651 SLC7A5P2-201ENST00000553010 536 ntBASIC20.75■□□□□ 0.91
HOXB3P14651 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.75■□□□□ 0.91
HOXB3P14651 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.75■□□□□ 0.91
HOXB3P14651 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HOXB3P14651 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HOXB3P14651 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HOXB3P14651 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.75■□□□□ 0.91
HOXB3P14651 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HOXB3P14651 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
HOXB3P14651 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
HOXB3P14651 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HOXB3P14651 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.74■□□□□ 0.91
HOXB3P14651 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
HOXB3P14651 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HOXB3P14651 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
HOXB3P14651 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HOXB3P14651 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HOXB3P14651 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
HOXB3P14651 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
HOXB3P14651 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.74■□□□□ 0.91
HOXB3P14651 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
HOXB3P14651 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC20.74■□□□□ 0.91
HOXB3P14651 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
HOXB3P14651 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC20.74■□□□□ 0.91
HOXB3P14651 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.74■□□□□ 0.91
HOXB3P14651 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.74■□□□□ 0.91
HOXB3P14651 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC20.74■□□□□ 0.91
HOXB3P14651 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.74■□□□□ 0.91
HOXB3P14651 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
HOXB3P14651 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
HOXB3P14651 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
HOXB3P14651 KRT87P-202ENST00000534226 1464 ntBASIC20.74■□□□□ 0.91
HOXB3P14651 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.74■□□□□ 0.91
HOXB3P14651 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
HOXB3P14651 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
HOXB3P14651 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HOXB3P14651 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HOXB3P14651 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HOXB3P14651 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HOXB3P14651 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.73■□□□□ 0.91
HOXB3P14651 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.73■□□□□ 0.91
HOXB3P14651 GCSHP5-201ENST00000443090 522 ntBASIC20.73■□□□□ 0.91
HOXB3P14651 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HOXB3P14651 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.73■□□□□ 0.91
HOXB3P14651 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC20.73■□□□□ 0.91
HOXB3P14651 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HOXB3P14651 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HOXB3P14651 AC012676.1-201ENST00000574705 1949 ntBASIC20.72■□□□□ 0.91
HOXB3P14651 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HOXB3P14651 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
HOXB3P14651 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
HOXB3P14651 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
HOXB3P14651 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
HOXB3P14651 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HOXB3P14651 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HOXB3P14651 KRT18P11-201ENST00000435214 1283 ntBASIC20.72■□□□□ 0.91
HOXB3P14651 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.72■□□□□ 0.91
HOXB3P14651 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC20.72■□□□□ 0.91
HOXB3P14651 AC098934.4-201ENST00000564127 592 ntBASIC20.72■□□□□ 0.91
HOXB3P14651 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.72■□□□□ 0.91
HOXB3P14651 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HOXB3P14651 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HOXB3P14651 AC055733.4-201ENST00000638462 1354 ntBASIC20.72■□□□□ 0.91
HOXB3P14651 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HOXB3P14651 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HOXB3P14651 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HOXB3P14651 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
HOXB3P14651 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
HOXB3P14651 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HOXB3P14651 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HOXB3P14651 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC20.71■□□□□ 0.91
HOXB3P14651 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.71■□□□□ 0.91
HOXB3P14651 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.71■□□□□ 0.91
HOXB3P14651 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.71■□□□□ 0.91
HOXB3P14651 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
HOXB3P14651 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HOXB3P14651 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HOXB3P14651 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HOXB3P14651 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HOXB3P14651 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HOXB3P14651 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
HOXB3P14651 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
HOXB3P14651 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms