Protein–RNA interactions for Protein: P0CH09

RPL40B, Ubiquitin-60S ribosomal protein L40, yeastyeast

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPL40BP0CH09 LCB4YOR171C 1875 nt2.33□□□□□ -2.04
RPL40BP0CH09 RPL24BYGR148C 468 nt2.33□□□□□ -2.04
RPL40BP0CH09 SIC1YLR079W 855 nt2.33□□□□□ -2.04
RPL40BP0CH09 HTA2YBL003C 399 nt2.33□□□□□ -2.04
RPL40BP0CH09 VPS71YML041C 843 nt2.33□□□□□ -2.04
RPL40BP0CH09 CPR8YNR028W 927 nt2.33□□□□□ -2.04
RPL40BP0CH09 ATG29YPL166W 642 nt2.33□□□□□ -2.04
RPL40BP0CH09 YCL007CYCL007C 393 nt2.33□□□□□ -2.04
RPL40BP0CH09 YBR238CYBR238C 2196 nt2.33□□□□□ -2.04
RPL40BP0CH09 KEL2YGR238C 2649 nt2.33□□□□□ -2.04
RPL40BP0CH09 SEC15YGL233W 2733 nt2.33□□□□□ -2.04
RPL40BP0CH09 PDS1YDR113C 1122 nt2.32□□□□□ -2.04
RPL40BP0CH09 YDR209CYDR209C 414 nt2.32□□□□□ -2.04
RPL40BP0CH09 MST27YGL051W 705 nt2.32□□□□□ -2.04
RPL40BP0CH09 YGR168CYGR168C 1131 nt2.32□□□□□ -2.04
RPL40BP0CH09 OKP1YGR179C 1221 nt2.32□□□□□ -2.04
RPL40BP0CH09 YJR111CYJR111C 852 nt2.32□□□□□ -2.04
RPL40BP0CH09 YAL065CYAL065C 387 nt2.32□□□□□ -2.04
RPL40BP0CH09 YLR326WYLR326W 723 nt2.32□□□□□ -2.04
RPL40BP0CH09 SSO2YMR183C 888 nt2.32□□□□□ -2.04
RPL40BP0CH09 AIM39YOL053W 1188 nt2.32□□□□□ -2.04
RPL40BP0CH09 NRG2YBR066C 663 nt2.32□□□□□ -2.04
RPL40BP0CH09 YPR203WYPR203W 309 nt2.32□□□□□ -2.04
RPL40BP0CH09 RSN1YMR266W 2862 nt2.32□□□□□ -2.04
RPL40BP0CH09 BCS1YDR375C 1371 nt2.32□□□□□ -2.04
RPL40BP0CH09 PRP3YDR473C 1410 nt2.32□□□□□ -2.04
RPL40BP0CH09 BCK1YJL095W 4437 nt2.32□□□□□ -2.04
RPL40BP0CH09 MRD1YPR112C 2664 nt2.32□□□□□ -2.04
RPL40BP0CH09 SXM1YDR395W 2835 nt2.32□□□□□ -2.04
RPL40BP0CH09 PDR11YIL013C 4236 nt2.31□□□□□ -2.04
RPL40BP0CH09 YKR078WYKR078W 1758 nt2.31□□□□□ -2.04
RPL40BP0CH09 GRX6YDL010W 696 nt2.31□□□□□ -2.04
RPL40BP0CH09 YKL066WYKL066W 444 nt2.31□□□□□ -2.04
RPL40BP0CH09 YBL029WYBL029W 1131 nt2.31□□□□□ -2.04
RPL40BP0CH09 PEX11YOL147C 711 nt2.31□□□□□ -2.04
RPL40BP0CH09 CCM1YGR150C 2595 nt2.31□□□□□ -2.04
RPL40BP0CH09 PEX6YNL329C 3093 nt2.31□□□□□ -2.04
RPL40BP0CH09 HSH155YMR288W 2916 nt2.3□□□□□ -2.04
RPL40BP0CH09 RBK1YCR036W 1002 nt2.3□□□□□ -2.04
RPL40BP0CH09 RPS24AYER074W 408 nt2.3□□□□□ -2.04
RPL40BP0CH09 STF2YGR008C 255 nt2.3□□□□□ -2.04
RPL40BP0CH09 FMC1YIL098C 468 nt2.3□□□□□ -2.04
RPL40BP0CH09 YJR056CYJR056C 711 nt2.3□□□□□ -2.04
RPL40BP0CH09 YLR302CYLR302C 363 nt2.3□□□□□ -2.04
RPL40BP0CH09 YNL143CYNL143C 393 nt2.3□□□□□ -2.04
RPL40BP0CH09 RSM19YNR037C 276 nt2.3□□□□□ -2.04
RPL40BP0CH09 SAD1YFR005C 1347 nt2.3□□□□□ -2.04
RPL40BP0CH09 RPO41YFL036W 4056 nt2.3□□□□□ -2.04
RPL40BP0CH09 MIG1YGL035C 1515 nt2.3□□□□□ -2.04
RPL40BP0CH09 GAS2YLR343W 1668 nt2.3□□□□□ -2.04
RPL40BP0CH09 JSN1YJR091C 3276 nt2.29□□□□□ -2.04
RPL40BP0CH09 AIM14YGL160W 1713 nt2.29□□□□□ -2.04
RPL40BP0CH09 STP1YDR463W 1560 nt2.29□□□□□ -2.04
RPL40BP0CH09 VMA8YEL051W 771 nt2.29□□□□□ -2.04
RPL40BP0CH09 DIS3YOL021C 3006 nt2.28□□□□□ -2.04
RPL40BP0CH09 NPL4YBR170C 1743 nt2.28□□□□□ -2.04
RPL40BP0CH09 KRE2YDR483W 1329 nt2.28□□□□□ -2.04
RPL40BP0CH09 NEM1YHR004C 1341 nt2.28□□□□□ -2.04
RPL40BP0CH09 YCR064CYCR064C 411 nt2.28□□□□□ -2.04
RPL40BP0CH09 TMN3YER113C 2121 nt2.28□□□□□ -2.04
RPL40BP0CH09 YGR073CYGR073C 372 nt2.28□□□□□ -2.04
RPL40BP0CH09 ERV41YML067C 1059 nt2.28□□□□□ -2.04
RPL40BP0CH09 PEX12YMR026C 1200 nt2.28□□□□□ -2.04
RPL40BP0CH09 MIC60YKR016W 1623 nt2.28□□□□□ -2.05
RPL40BP0CH09 HAA1YPR008W 2085 nt2.27□□□□□ -2.05
RPL40BP0CH09 SMC6YLR383W 3345 nt2.27□□□□□ -2.05
RPL40BP0CH09 YPR1YDR368W 939 nt2.27□□□□□ -2.05
RPL40BP0CH09 FRQ1YDR373W 573 nt2.27□□□□□ -2.05
RPL40BP0CH09 YER079C-AYER079C-A 339 nt2.27□□□□□ -2.05
RPL40BP0CH09 YIR043CYIR043C 693 nt2.27□□□□□ -2.05
RPL40BP0CH09 TTI2YJR136C 1266 nt2.27□□□□□ -2.05
RPL40BP0CH09 YMR194C-AYMR194C-A 225 nt2.27□□□□□ -2.05
RPL40BP0CH09 REG2YBR050C 1017 nt2.27□□□□□ -2.05
RPL40BP0CH09 SEC26YDR238C 2922 nt2.27□□□□□ -2.05
RPL40BP0CH09 NAB3YPL190C 2409 nt2.27□□□□□ -2.05
RPL40BP0CH09 BOI1YBL085W 2943 nt2.26□□□□□ -2.05
RPL40BP0CH09 RPS23AYGR118W 438 nt2.26□□□□□ -2.05
RPL40BP0CH09 SFH5YJL145W 885 nt2.26□□□□□ -2.05
RPL40BP0CH09 ISA2YPR067W 558 nt2.26□□□□□ -2.05
RPL40BP0CH09 RPS23BYPR132W 438 nt2.26□□□□□ -2.05
RPL40BP0CH09 MLH1YMR167W 2310 nt2.26□□□□□ -2.05
RPL40BP0CH09 PDR1YGL013C 3207 nt2.26□□□□□ -2.05
RPL40BP0CH09 EPO1YMR124W 2832 nt2.26□□□□□ -2.05
RPL40BP0CH09 MSA1YOR066W 1890 nt2.25□□□□□ -2.05
RPL40BP0CH09 CDC55YGL190C 1581 nt2.25□□□□□ -2.05
RPL40BP0CH09 SOL3YHR163W 750 nt2.25□□□□□ -2.05
RPL40BP0CH09 PCD1YLR151C 1023 nt2.25□□□□□ -2.05
RPL40BP0CH09 COQ9YLR201C 783 nt2.25□□□□□ -2.05
RPL40BP0CH09 YGR237CYGR237C 2358 nt2.25□□□□□ -2.05
RPL40BP0CH09 SPF1YEL031W 3648 nt2.25□□□□□ -2.05
RPL40BP0CH09 PRM2YIL037C 1971 nt2.25□□□□□ -2.05
RPL40BP0CH09 KRE33YNL132W 3171 nt2.24□□□□□ -2.05
RPL40BP0CH09 NUM1YDR150W 8247 nt2.24□□□□□ -2.05
RPL40BP0CH09 SKT5YBL061C 2091 nt2.24□□□□□ -2.05
RPL40BP0CH09 UTP15YMR093W 1542 nt2.24□□□□□ -2.05
RPL40BP0CH09 MGR3YMR115W 1506 nt2.24□□□□□ -2.05
RPL40BP0CH09 SKI8YGL213C 1194 nt2.24□□□□□ -2.05
RPL40BP0CH09 ADY4YLR227C 1482 nt2.24□□□□□ -2.05
RPL40BP0CH09 HSC82YMR186W 2118 nt2.24□□□□□ -2.05
RPL40BP0CH09 YGR117CYGR117C 1431 nt2.24□□□□□ -2.05
Retrieved 100 of 7,029 protein–RNA pairs in 18.3 ms