Protein–RNA interactions for Protein: P0C2J0

TY1B-PR2, Transposon Ty1-PR2 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,756 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-PR2P0C2J0 ASP1YDR321W 1146 nt2.95□□□□□ -1.94
TY1B-PR2P0C2J0 SNM1YDR478W 597 nt2.95□□□□□ -1.94
TY1B-PR2P0C2J0 YGR073CYGR073C 372 nt2.95□□□□□ -1.94
TY1B-PR2P0C2J0 YGR126WYGR126W 693 nt2.95□□□□□ -1.94
TY1B-PR2P0C2J0 YHR137C-AYHR137C-A 651 nt2.95□□□□□ -1.94
TY1B-PR2P0C2J0 CFT1YDR301W 4074 nt2.95□□□□□ -1.94
TY1B-PR2P0C2J0 MSN4YKL062W 1893 nt2.95□□□□□ -1.94
TY1B-PR2P0C2J0 ADH4YGL256W 1149 nt2.95□□□□□ -1.94
TY1B-PR2P0C2J0 YGR168CYGR168C 1131 nt2.95□□□□□ -1.94
TY1B-PR2P0C2J0 PCL7YIL050W 858 nt2.95□□□□□ -1.94
TY1B-PR2P0C2J0 YLR365WYLR365W 333 nt2.95□□□□□ -1.94
TY1B-PR2P0C2J0 SAS2YMR127C 1017 nt2.95□□□□□ -1.94
TY1B-PR2P0C2J0 YAP7YOL028C 738 nt2.95□□□□□ -1.94
TY1B-PR2P0C2J0 SAK1YER129W 3429 nt2.94□□□□□ -1.94
TY1B-PR2P0C2J0 SET1YHR119W 3243 nt2.94□□□□□ -1.94
TY1B-PR2P0C2J0 TIF4631YGR162W 2859 nt2.94□□□□□ -1.94
TY1B-PR2P0C2J0 DBP7YKR024C 2229 nt2.94□□□□□ -1.94
TY1B-PR2P0C2J0 YHL037CYHL037C 402 nt2.94□□□□□ -1.94
TY1B-PR2P0C2J0 YLR428CYLR428C 345 nt2.94□□□□□ -1.94
TY1B-PR2P0C2J0 TFC1YBR123C 1950 nt2.94□□□□□ -1.94
TY1B-PR2P0C2J0 CDC24YAL041W 2565 nt2.93□□□□□ -1.94
TY1B-PR2P0C2J0 snR37snR37 386 nt2.93□□□□□ -1.94
TY1B-PR2P0C2J0 GCY1YOR120W 939 nt2.92□□□□□ -1.94
TY1B-PR2P0C2J0 TRS130YMR218C 3309 nt2.92□□□□□ -1.94
TY1B-PR2P0C2J0 MLH1YMR167W 2310 nt2.92□□□□□ -1.94
TY1B-PR2P0C2J0 BCS1YDR375C 1371 nt2.92□□□□□ -1.94
TY1B-PR2P0C2J0 CBP1YJL209W 1965 nt2.92□□□□□ -1.94
TY1B-PR2P0C2J0 YDR401WYDR401W 564 nt2.92□□□□□ -1.94
TY1B-PR2P0C2J0 IZH1YDR492W 951 nt2.92□□□□□ -1.94
TY1B-PR2P0C2J0 YAL065CYAL065C 387 nt2.92□□□□□ -1.94
TY1B-PR2P0C2J0 IDH2YOR136W 1110 nt2.92□□□□□ -1.94
TY1B-PR2P0C2J0 YOR238WYOR238W 912 nt2.92□□□□□ -1.94
TY1B-PR2P0C2J0 YJL016WYJL016W 1686 nt2.91□□□□□ -1.94
TY1B-PR2P0C2J0 STU1YBL034C 4542 nt2.91□□□□□ -1.94
TY1B-PR2P0C2J0 RCE1YMR274C 948 nt2.91□□□□□ -1.94
TY1B-PR2P0C2J0 YHR086W-AYHR086W-A 162 nt2.9□□□□□ -1.94
TY1B-PR2P0C2J0 IBD2YNL164C 1056 nt2.9□□□□□ -1.94
TY1B-PR2P0C2J0 ATP3YBR039W 936 nt2.9□□□□□ -1.94
TY1B-PR2P0C2J0 TDA3YHR009C 1572 nt2.9□□□□□ -1.94
TY1B-PR2P0C2J0 LAA1YJL207C 6045 nt2.9□□□□□ -1.95
TY1B-PR2P0C2J0 STT4YLR305C 5703 nt2.9□□□□□ -1.95
TY1B-PR2P0C2J0 ERG9YHR190W 1335 nt2.9□□□□□ -1.95
TY1B-PR2P0C2J0 CUS1YMR240C 1311 nt2.9□□□□□ -1.95
TY1B-PR2P0C2J0 RPS31YLR167W 459 nt2.89□□□□□ -1.95
TY1B-PR2P0C2J0 GTR1YML121W 933 nt2.89□□□□□ -1.95
TY1B-PR2P0C2J0 VAM10YOR068C 345 nt2.89□□□□□ -1.95
TY1B-PR2P0C2J0 MDV1YJL112W 2145 nt2.89□□□□□ -1.95
TY1B-PR2P0C2J0 YDR089WYDR089W 2610 nt2.89□□□□□ -1.95
TY1B-PR2P0C2J0 SRG1SRG1 551 nt2.89□□□□□ -1.95
TY1B-PR2P0C2J0 SRS2YJL092W 3525 nt2.88□□□□□ -1.95
TY1B-PR2P0C2J0 CAT8YMR280C 4302 nt2.88□□□□□ -1.95
TY1B-PR2P0C2J0 LDB17YDL146W 1476 nt2.88□□□□□ -1.95
TY1B-PR2P0C2J0 MIX14YDR031W 366 nt2.88□□□□□ -1.95
TY1B-PR2P0C2J0 SLD7YOR060C 774 nt2.88□□□□□ -1.95
TY1B-PR2P0C2J0 YPR147CYPR147C 915 nt2.88□□□□□ -1.95
TY1B-PR2P0C2J0 MSH3YCR092C 3057 nt2.88□□□□□ -1.95
TY1B-PR2P0C2J0 DIT1YDR403W 1611 nt2.88□□□□□ -1.95
TY1B-PR2P0C2J0 YNR071CYNR071C 1029 nt2.87□□□□□ -1.95
TY1B-PR2P0C2J0 RPC40YPR110C 1008 nt2.87□□□□□ -1.95
TY1B-PR2P0C2J0 YHR095WYHR095W 495 nt2.87□□□□□ -1.95
TY1B-PR2P0C2J0 YAR1YPL239W 603 nt2.87□□□□□ -1.95
TY1B-PR2P0C2J0 YBR197CYBR197C 654 nt2.87□□□□□ -1.95
TY1B-PR2P0C2J0 BSD2YBR290W 966 nt2.87□□□□□ -1.95
TY1B-PR2P0C2J0 VPH1YOR270C 2523 nt2.86□□□□□ -1.95
TY1B-PR2P0C2J0 MIF2YKL089W 1650 nt2.86□□□□□ -1.95
TY1B-PR2P0C2J0 YJL147CYJL147C 1149 nt2.86□□□□□ -1.95
TY1B-PR2P0C2J0 BOS1YLR078C 735 nt2.86□□□□□ -1.95
TY1B-PR2P0C2J0 YLR326WYLR326W 723 nt2.86□□□□□ -1.95
TY1B-PR2P0C2J0 ADI1YMR009W 540 nt2.86□□□□□ -1.95
TY1B-PR2P0C2J0 COA6YMR244C-A 315 nt2.86□□□□□ -1.95
TY1B-PR2P0C2J0 NUF2YOL069W 1356 nt2.86□□□□□ -1.95
TY1B-PR2P0C2J0 SXM1YDR395W 2835 nt2.86□□□□□ -1.95
TY1B-PR2P0C2J0 YHR073W-AYHR073W-A 177 nt2.85□□□□□ -1.95
TY1B-PR2P0C2J0 NSE1YLR007W 1011 nt2.85□□□□□ -1.95
TY1B-PR2P0C2J0 PEX17YNL214W 600 nt2.85□□□□□ -1.95
TY1B-PR2P0C2J0 YPR077CYPR077C 372 nt2.85□□□□□ -1.95
TY1B-PR2P0C2J0 STE12YHR084W 2067 nt2.85□□□□□ -1.95
TY1B-PR2P0C2J0 LAP3YNL239W 1365 nt2.85□□□□□ -1.95
TY1B-PR2P0C2J0 MMS1YPR164W 4224 nt2.85□□□□□ -1.95
TY1B-PR2P0C2J0 TPD3YAL016W 1908 nt2.85□□□□□ -1.95
TY1B-PR2P0C2J0 TOF1YNL273W 3717 nt2.85□□□□□ -1.95
TY1B-PR2P0C2J0 TMA16YOR252W 537 nt2.84□□□□□ -1.95
TY1B-PR2P0C2J0 YJR039WYJR039W 3366 nt2.84□□□□□ -1.95
TY1B-PR2P0C2J0 ALO1YML086C 1581 nt2.84□□□□□ -1.95
TY1B-PR2P0C2J0 MDS3YGL197W 4464 nt2.84□□□□□ -1.95
TY1B-PR2P0C2J0 YCR013CYCR013C 648 nt2.84□□□□□ -1.96
TY1B-PR2P0C2J0 YEL018C-AYEL018C-A 534 nt2.84□□□□□ -1.96
TY1B-PR2P0C2J0 ELO3YLR372W 1038 nt2.84□□□□□ -1.96
TY1B-PR2P0C2J0 ESC1YMR219W 4977 nt2.84□□□□□ -1.96
TY1B-PR2P0C2J0 YER165C-AYER165C-A 357 nt2.83□□□□□ -1.96
TY1B-PR2P0C2J0 BRR6YGL247W 594 nt2.83□□□□□ -1.96
TY1B-PR2P0C2J0 YOR333CYOR333C 417 nt2.83□□□□□ -1.96
TY1B-PR2P0C2J0 MGR3YMR115W 1506 nt2.83□□□□□ -1.96
TY1B-PR2P0C2J0 SKI3YPR189W 4299 nt2.83□□□□□ -1.96
TY1B-PR2P0C2J0 JSN1YJR091C 3276 nt2.83□□□□□ -1.96
TY1B-PR2P0C2J0 YDR131CYDR131C 1671 nt2.83□□□□□ -1.96
TY1B-PR2P0C2J0 NFI1YOR156C 2181 nt2.83□□□□□ -1.96
TY1B-PR2P0C2J0 TIF35YDR429C 825 nt2.82□□□□□ -1.96
TY1B-PR2P0C2J0 SPS4YOR313C 1017 nt2.82□□□□□ -1.96
TY1B-PR2P0C2J0 SAS4YDR181C 1446 nt2.82□□□□□ -1.96
Retrieved 100 of 7,029 protein–RNA pairs in 48.7 ms