Protein–RNA interactions for Protein: P04819

CDC9, DNA ligase 1, yeastyeast

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC9P04819 YBR201C-AYBR201C-A 204 nt4.19□□□□□ -1.74
CDC9P04819 RRB1YMR131C 1536 nt4.19□□□□□ -1.74
CDC9P04819 TIF4632YGL049C 2745 nt4.19□□□□□ -1.74
CDC9P04819 CHK1YBR274W 1584 nt4.19□□□□□ -1.74
CDC9P04819 RRN7YJL025W 1545 nt4.18□□□□□ -1.74
CDC9P04819 YDL016CYDL016C 303 nt4.18□□□□□ -1.74
CDC9P04819 ARF2YDL137W 546 nt4.18□□□□□ -1.74
CDC9P04819 RPL34AYER056C-A 366 nt4.18□□□□□ -1.74
CDC9P04819 GPP1YIL053W 753 nt4.18□□□□□ -1.74
CDC9P04819 MRPL20YKR085C 588 nt4.18□□□□□ -1.74
CDC9P04819 YNL109WYNL109W 546 nt4.18□□□□□ -1.74
CDC9P04819 NDC80YIL144W 2076 nt4.18□□□□□ -1.74
CDC9P04819 APC1YNL172W 5247 nt4.18□□□□□ -1.74
CDC9P04819 TEL1YBL088C 8364 nt4.18□□□□□ -1.74
CDC9P04819 CHL1YPL008W 2586 nt4.17□□□□□ -1.74
CDC9P04819 ISM1YPL040C 3009 nt4.17□□□□□ -1.74
CDC9P04819 GPI1YGR216C 1830 nt4.17□□□□□ -1.74
CDC9P04819 AZR1YGR224W 1842 nt4.17□□□□□ -1.74
CDC9P04819 HMLALPHA2YCL067C 633 nt4.17□□□□□ -1.74
CDC9P04819 MATALPHA2YCR039C 633 nt4.17□□□□□ -1.74
CDC9P04819 YDR271CYDR271C 372 nt4.17□□□□□ -1.74
CDC9P04819 HNT2YDR305C 654 nt4.17□□□□□ -1.74
CDC9P04819 RPS18AYDR450W 441 nt4.17□□□□□ -1.74
CDC9P04819 SLD5YDR489W 885 nt4.17□□□□□ -1.74
CDC9P04819 MXR1YER042W 555 nt4.17□□□□□ -1.74
CDC9P04819 YLL044WYLL044W 447 nt4.17□□□□□ -1.74
CDC9P04819 YPT53YNL093W 663 nt4.17□□□□□ -1.74
CDC9P04819 YNL181WYNL181W 1224 nt4.17□□□□□ -1.74
CDC9P04819 YNL235CYNL235C 432 nt4.17□□□□□ -1.74
CDC9P04819 SPR3YGR059W 1539 nt4.16□□□□□ -1.74
CDC9P04819 EXO70YJL085W 1872 nt4.16□□□□□ -1.74
CDC9P04819 CYM1YDR430C 2970 nt4.16□□□□□ -1.74
CDC9P04819 TRM44YPL030W 1704 nt4.16□□□□□ -1.74
CDC9P04819 AKL1YBR059C 3327 nt4.16□□□□□ -1.74
CDC9P04819 YCR085WYCR085W 354 nt4.16□□□□□ -1.74
CDC9P04819 RPS29BYDL061C 171 nt4.16□□□□□ -1.74
CDC9P04819 YDR199WYDR199W 366 nt4.16□□□□□ -1.74
CDC9P04819 YHL049CYHL049C 816 nt4.16□□□□□ -1.74
CDC9P04819 YIL029CYIL029C 429 nt4.16□□□□□ -1.74
CDC9P04819 RPL17BYJL177W 555 nt4.16□□□□□ -1.74
CDC9P04819 YKL069WYKL069W 543 nt4.16□□□□□ -1.74
CDC9P04819 ATP18YML081C-A 180 nt4.16□□□□□ -1.74
CDC9P04819 ECM23YPL021W 564 nt4.16□□□□□ -1.74
CDC9P04819 DPB3YBR278W 606 nt4.16□□□□□ -1.74
CDC9P04819 HOT1YMR172W 2160 nt4.16□□□□□ -1.74
CDC9P04819 MDM36YPR083W 1740 nt4.15□□□□□ -1.74
CDC9P04819 VIP1YLR410W 3441 nt4.15□□□□□ -1.74
CDC9P04819 YDR545C-AYDR545C-A 480 nt4.15□□□□□ -1.75
CDC9P04819 RIP1YEL024W 648 nt4.15□□□□□ -1.75
CDC9P04819 YEL077W-AYEL077W-A 483 nt4.15□□□□□ -1.75
CDC9P04819 YER190C-BYER190C-B 483 nt4.15□□□□□ -1.75
CDC9P04819 OTU1YFL044C 906 nt4.15□□□□□ -1.75
CDC9P04819 YFL068WYFL068W 483 nt4.15□□□□□ -1.75
CDC9P04819 tL(UAG)JtL(UAG)J 82 nt4.15□□□□□ -1.75
CDC9P04819 tL(UAG)L1tL(UAG)L1 82 nt4.15□□□□□ -1.75
CDC9P04819 tL(UAG)L2tL(UAG)L2 82 nt4.15□□□□□ -1.75
CDC9P04819 COX4YGL187C 468 nt4.15□□□□□ -1.75
CDC9P04819 UPF3YGR072W 1164 nt4.15□□□□□ -1.75
CDC9P04819 YGR296C-BYGR296C-B 483 nt4.15□□□□□ -1.75
CDC9P04819 YHL050W-AYHL050W-A 483 nt4.15□□□□□ -1.75
CDC9P04819 YHR028W-AYHR028W-A 321 nt4.15□□□□□ -1.75
CDC9P04819 YHR219C-AYHR219C-A 483 nt4.15□□□□□ -1.75
CDC9P04819 YIL068W-AYIL068W-A 384 nt4.15□□□□□ -1.75
CDC9P04819 YIL177W-AYIL177W-A 483 nt4.15□□□□□ -1.75
CDC9P04819 YJL225W-AYJL225W-A 483 nt4.15□□□□□ -1.75
CDC9P04819 RPA12YJR063W 378 nt4.15□□□□□ -1.75
CDC9P04819 RPL43BYJR094W-A 279 nt4.15□□□□□ -1.75
CDC9P04819 YLL066W-AYLL066W-A 483 nt4.15□□□□□ -1.75
CDC9P04819 YLL067W-AYLL067W-A 483 nt4.15□□□□□ -1.75
CDC9P04819 YAR019W-AYAR019W-A 333 nt4.15□□□□□ -1.75
CDC9P04819 YLR466C-AYLR466C-A 483 nt4.15□□□□□ -1.75
CDC9P04819 YLR467C-AYLR467C-A 483 nt4.15□□□□□ -1.75
CDC9P04819 YML133W-BYML133W-B 483 nt4.15□□□□□ -1.75
CDC9P04819 YNL339W-BYNL339W-B 483 nt4.15□□□□□ -1.75
CDC9P04819 YBL113W-AYBL113W-A 483 nt4.15□□□□□ -1.75
CDC9P04819 YOR396C-AYOR396C-A 483 nt4.15□□□□□ -1.75
CDC9P04819 ICY2YPL250C 411 nt4.15□□□□□ -1.75
CDC9P04819 YPL283W-BYPL283W-B 483 nt4.15□□□□□ -1.75
CDC9P04819 YPR204C-AYPR204C-A 483 nt4.15□□□□□ -1.75
CDC9P04819 HDA2YDR295C 2025 nt4.15□□□□□ -1.75
CDC9P04819 ASI3YNL008C 2031 nt4.15□□□□□ -1.75
CDC9P04819 NEL1YHR035W 1893 nt4.15□□□□□ -1.75
CDC9P04819 LAS1YKR063C 1509 nt4.15□□□□□ -1.75
CDC9P04819 YER158CYER158C 1722 nt4.15□□□□□ -1.75
CDC9P04819 DIP2YLR129W 2832 nt4.14□□□□□ -1.75
CDC9P04819 FIN1YDR130C 876 nt4.14□□□□□ -1.75
CDC9P04819 tK(CUU)CtK(CUU)C 73 nt4.14□□□□□ -1.75
CDC9P04819 tK(CUU)D1tK(CUU)D1 73 nt4.14□□□□□ -1.75
CDC9P04819 tK(CUU)D2tK(CUU)D2 73 nt4.14□□□□□ -1.75
CDC9P04819 tK(CUU)E1tK(CUU)E1 73 nt4.14□□□□□ -1.75
CDC9P04819 tK(CUU)E2tK(CUU)E2 73 nt4.14□□□□□ -1.75
CDC9P04819 tK(CUU)FtK(CUU)F 73 nt4.14□□□□□ -1.75
CDC9P04819 tK(CUU)G1tK(CUU)G1 73 nt4.14□□□□□ -1.75
CDC9P04819 tK(CUU)G2tK(CUU)G2 73 nt4.14□□□□□ -1.75
CDC9P04819 tK(CUU)G3tK(CUU)G3 73 nt4.14□□□□□ -1.75
CDC9P04819 tK(CUU)ItK(CUU)I 73 nt4.14□□□□□ -1.75
CDC9P04819 tK(CUU)JtK(CUU)J 73 nt4.14□□□□□ -1.75
CDC9P04819 tK(CUU)KtK(CUU)K 73 nt4.14□□□□□ -1.75
CDC9P04819 tK(CUU)MtK(CUU)M 73 nt4.14□□□□□ -1.75
CDC9P04819 tK(CUU)PtK(CUU)P 73 nt4.14□□□□□ -1.75
Retrieved 100 of 7,029 protein–RNA pairs in 30.4 ms