Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.4■□□□□ 0.7
P04436 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.4■□□□□ 0.7
P04436 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
P04436 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
P04436 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
P04436 UBE2DNL-204ENST00000602536 740 ntBASIC19.4■□□□□ 0.7
P04436 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.4■□□□□ 0.7
P04436 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
P04436 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
P04436 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
P04436 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
P04436 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
P04436 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.7
P04436 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.39■□□□□ 0.7
P04436 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
P04436 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19.39■□□□□ 0.7
P04436 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19.39■□□□□ 0.69
P04436 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC19.39■□□□□ 0.69
P04436 AC008175.2-201ENST00000612840 297 ntBASIC19.39■□□□□ 0.69
P04436 AC120498.10-201ENST00000621827 505 ntBASIC19.39■□□□□ 0.69
P04436 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
P04436 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
P04436 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
P04436 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.39■□□□□ 0.69
P04436 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
P04436 AC068473.5-201ENST00000616428 2072 ntBASIC19.39■□□□□ 0.69
P04436 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
P04436 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
P04436 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
P04436 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
P04436 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
P04436 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
P04436 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.38■□□□□ 0.69
P04436 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.38■□□□□ 0.69
P04436 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.38■□□□□ 0.69
P04436 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.38■□□□□ 0.69
P04436 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC19.38■□□□□ 0.69
P04436 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
P04436 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
P04436 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
P04436 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
P04436 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
P04436 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
P04436 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
P04436 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
P04436 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
P04436 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
P04436 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.37■□□□□ 0.69
P04436 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.37■□□□□ 0.69
P04436 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
P04436 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.37■□□□□ 0.69
P04436 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.37■□□□□ 0.69
P04436 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.37■□□□□ 0.69
P04436 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC19.37■□□□□ 0.69
P04436 MDK-213ENST00000617138 635 ntTSL 2 BASIC19.37■□□□□ 0.69
P04436 AC073111.5-205ENST00000641717 521 ntBASIC19.37■□□□□ 0.69
P04436 MYCNOS-205ENST00000641950 531 ntBASIC19.37■□□□□ 0.69
P04436 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
P04436 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
P04436 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
P04436 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
P04436 GUSBP5-202ENST00000510805 1989 ntBASIC19.37■□□□□ 0.69
P04436 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
P04436 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
P04436 AC003102.1-202ENST00000563394 1796 ntBASIC19.37■□□□□ 0.69
P04436 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
P04436 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
P04436 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.36■□□□□ 0.69
P04436 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.36■□□□□ 0.69
P04436 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
P04436 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.36■□□□□ 0.69
P04436 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
P04436 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
P04436 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
P04436 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
P04436 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
P04436 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
P04436 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
P04436 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
P04436 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
P04436 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.36■□□□□ 0.69
P04436 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC19.36■□□□□ 0.69
P04436 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC19.36■□□□□ 0.69
P04436 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.36■□□□□ 0.69
P04436 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
P04436 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
P04436 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
P04436 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC19.36■□□□□ 0.69
P04436 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
P04436 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
P04436 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.36■□□□□ 0.69
P04436 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
P04436 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
P04436 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.36■□□□□ 0.69
P04436 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
P04436 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
P04436 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
P04436 FAM99A-202ENST00000538190 1989 ntBASIC19.35■□□□□ 0.69
P04436 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
P04436 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms