Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.78■□□□□ 0.92
TNFP01375 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
TNFP01375 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
TNFP01375 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TNFP01375 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
TNFP01375 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
TNFP01375 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TNFP01375 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.77■□□□□ 0.92
TNFP01375 AC083906.2-201ENST00000511578 360 ntBASIC20.77■□□□□ 0.92
TNFP01375 AL050303.2-201ENST00000619798 666 ntBASIC20.77■□□□□ 0.92
TNFP01375 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.77■□□□□ 0.92
TNFP01375 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TNFP01375 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TNFP01375 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TNFP01375 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
TNFP01375 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.77■□□□□ 0.91
TNFP01375 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
TNFP01375 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
TNFP01375 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
TNFP01375 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
TNFP01375 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
TNFP01375 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.76■□□□□ 0.91
TNFP01375 AL355802.2-201ENST00000402069 882 ntBASIC20.76■□□□□ 0.91
TNFP01375 CNN2P6-201ENST00000439038 900 ntBASIC20.76■□□□□ 0.91
TNFP01375 AC013268.1-206ENST00000638368 961 ntBASIC20.76■□□□□ 0.91
TNFP01375 AC112229.1-201ENST00000639295 961 ntBASIC20.76■□□□□ 0.91
TNFP01375 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TNFP01375 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
TNFP01375 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.76■□□□□ 0.91
TNFP01375 AC003102.1-202ENST00000563394 1796 ntBASIC20.76■□□□□ 0.91
TNFP01375 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
TNFP01375 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
TNFP01375 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
TNFP01375 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.75■□□□□ 0.91
TNFP01375 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
TNFP01375 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.75■□□□□ 0.91
TNFP01375 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.75■□□□□ 0.91
TNFP01375 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
TNFP01375 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.75■□□□□ 0.91
TNFP01375 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TNFP01375 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TNFP01375 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
TNFP01375 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
TNFP01375 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.75■□□□□ 0.91
TNFP01375 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TNFP01375 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TNFP01375 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.75■□□□□ 0.91
TNFP01375 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.75■□□□□ 0.91
TNFP01375 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TNFP01375 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
TNFP01375 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.74■□□□□ 0.91
TNFP01375 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TNFP01375 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TNFP01375 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.74■□□□□ 0.91
TNFP01375 DENND3-207ENST00000518347 850 ntTSL 2 BASIC20.74■□□□□ 0.91
TNFP01375 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
TNFP01375 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.74■□□□□ 0.91
TNFP01375 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TNFP01375 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TNFP01375 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TNFP01375 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
TNFP01375 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
TNFP01375 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TNFP01375 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
TNFP01375 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TNFP01375 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.73■□□□□ 0.91
TNFP01375 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.73■□□□□ 0.91
TNFP01375 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.73■□□□□ 0.91
TNFP01375 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
TNFP01375 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.73■□□□□ 0.91
TNFP01375 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.73■□□□□ 0.91
TNFP01375 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TNFP01375 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TNFP01375 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.73■□□□□ 0.91
TNFP01375 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TNFP01375 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.73■□□□□ 0.91
TNFP01375 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TNFP01375 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.72■□□□□ 0.91
TNFP01375 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.72■□□□□ 0.91
TNFP01375 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.72■□□□□ 0.91
TNFP01375 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
TNFP01375 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.72■□□□□ 0.91
TNFP01375 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TNFP01375 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.72■□□□□ 0.91
TNFP01375 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
TNFP01375 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
TNFP01375 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TNFP01375 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TNFP01375 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TNFP01375 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TNFP01375 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TNFP01375 KRT16P2-201ENST00000414673 1423 ntBASIC20.71■□□□□ 0.91
TNFP01375 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TNFP01375 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TNFP01375 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
TNFP01375 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TNFP01375 SLC29A4P1-201ENST00000398760 971 ntBASIC20.71■□□□□ 0.91
TNFP01375 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.71■□□□□ 0.91
TNFP01375 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.71■□□□□ 0.91
TNFP01375 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms