Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC28.45■■■□□ 2.14
LTN1O94822 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC28.44■■■□□ 2.14
LTN1O94822 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
LTN1O94822 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
LTN1O94822 AC093323.1-202ENST00000635031 2045 ntBASIC28.44■■■□□ 2.14
LTN1O94822 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
LTN1O94822 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC28.44■■■□□ 2.14
LTN1O94822 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC28.43■■■□□ 2.14
LTN1O94822 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC28.43■■■□□ 2.14
LTN1O94822 AC091874.3-201ENST00000512672 1195 ntBASIC28.43■■■□□ 2.14
LTN1O94822 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC28.43■■■□□ 2.14
LTN1O94822 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC28.43■■■□□ 2.14
LTN1O94822 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
LTN1O94822 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC28.43■■■□□ 2.14
LTN1O94822 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC28.43■■■□□ 2.14
LTN1O94822 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC28.43■■■□□ 2.14
LTN1O94822 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
LTN1O94822 RARG-204ENST00000543726 1779 ntTSL 2 BASIC28.42■■■□□ 2.14
LTN1O94822 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC28.42■■■□□ 2.14
LTN1O94822 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC28.42■■■□□ 2.14
LTN1O94822 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC28.42■■■□□ 2.14
LTN1O94822 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
LTN1O94822 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
LTN1O94822 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC28.42■■■□□ 2.14
LTN1O94822 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC28.42■■■□□ 2.14
LTN1O94822 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
LTN1O94822 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
LTN1O94822 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC28.42■■■□□ 2.14
LTN1O94822 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
LTN1O94822 GAS7-202ENST00000396115 929 ntTSL 5 BASIC28.42■■■□□ 2.14
LTN1O94822 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC28.42■■■□□ 2.14
LTN1O94822 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC28.42■■■□□ 2.14
LTN1O94822 AC243732.1-201ENST00000612648 864 ntBASIC28.42■■■□□ 2.14
LTN1O94822 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC28.41■■■□□ 2.14
LTN1O94822 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC28.41■■■□□ 2.14
LTN1O94822 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC28.41■■■□□ 2.14
LTN1O94822 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
LTN1O94822 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
LTN1O94822 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
LTN1O94822 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC28.41■■■□□ 2.14
LTN1O94822 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC28.41■■■□□ 2.14
LTN1O94822 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
LTN1O94822 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
LTN1O94822 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC28.41■■■□□ 2.14
LTN1O94822 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC28.41■■■□□ 2.14
LTN1O94822 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
LTN1O94822 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
LTN1O94822 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
LTN1O94822 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC28.4■■■□□ 2.14
LTN1O94822 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
LTN1O94822 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC28.4■■■□□ 2.14
LTN1O94822 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC28.4■■■□□ 2.14
LTN1O94822 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC28.4■■■□□ 2.14
LTN1O94822 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC28.4■■■□□ 2.14
LTN1O94822 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC28.4■■■□□ 2.14
LTN1O94822 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC28.4■■■□□ 2.14
LTN1O94822 PRORSD1P-201ENST00000295112 541 ntBASIC28.39■■■□□ 2.14
LTN1O94822 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC28.39■■■□□ 2.14
LTN1O94822 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC28.39■■■□□ 2.14
LTN1O94822 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC28.39■■■□□ 2.14
LTN1O94822 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
LTN1O94822 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
LTN1O94822 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
LTN1O94822 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
LTN1O94822 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.13
LTN1O94822 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC28.39■■■□□ 2.13
LTN1O94822 INO80E-214ENST00000620599 515 ntTSL 2 BASIC28.39■■■□□ 2.13
LTN1O94822 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC28.39■■■□□ 2.13
LTN1O94822 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC28.39■■■□□ 2.13
LTN1O94822 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC28.39■■■□□ 2.13
LTN1O94822 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
LTN1O94822 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
LTN1O94822 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
LTN1O94822 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC28.38■■■□□ 2.13
LTN1O94822 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC28.38■■■□□ 2.13
LTN1O94822 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC28.38■■■□□ 2.13
LTN1O94822 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
LTN1O94822 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC28.38■■■□□ 2.13
LTN1O94822 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
LTN1O94822 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC28.37■■■□□ 2.13
LTN1O94822 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC28.37■■■□□ 2.13
LTN1O94822 ADM-205ENST00000528544 586 ntTSL 2 BASIC28.37■■■□□ 2.13
LTN1O94822 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC28.37■■■□□ 2.13
LTN1O94822 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
LTN1O94822 LTK-203ENST00000453182 2412 ntTSL 2 BASIC28.37■■■□□ 2.13
LTN1O94822 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
LTN1O94822 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC28.37■■■□□ 2.13
LTN1O94822 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC28.37■■■□□ 2.13
LTN1O94822 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC28.37■■■□□ 2.13
LTN1O94822 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC28.37■■■□□ 2.13
LTN1O94822 AC008694.1-202ENST00000636953 945 ntBASIC28.37■■■□□ 2.13
LTN1O94822 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
LTN1O94822 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC28.37■■■□□ 2.13
LTN1O94822 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
LTN1O94822 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
LTN1O94822 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
LTN1O94822 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC28.36■■■□□ 2.13
LTN1O94822 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
LTN1O94822 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC28.36■■■□□ 2.13
LTN1O94822 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC28.36■■■□□ 2.13
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms