Protein–RNA interactions for Protein: O88597

Becn1, Beclin-1, mousemouse

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Becn1O88597 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Becn1O88597 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Becn1O88597 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Becn1O88597 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Becn1O88597 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Becn1O88597 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Becn1O88597 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Becn1O88597 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC21.34■■□□□ 1.01
Becn1O88597 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Becn1O88597 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
Becn1O88597 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Becn1O88597 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Becn1O88597 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Becn1O88597 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
Becn1O88597 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC21.33■■□□□ 1
Becn1O88597 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC21.32■■□□□ 1
Becn1O88597 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Becn1O88597 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Becn1O88597 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Becn1O88597 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC21.32■■□□□ 1
Becn1O88597 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC21.32■■□□□ 1
Becn1O88597 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Becn1O88597 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC21.32■■□□□ 1
Becn1O88597 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Becn1O88597 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Becn1O88597 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC21.32■■□□□ 1
Becn1O88597 Gm15853-202ENSMUST00000195518 2041 ntBASIC21.32■■□□□ 1
Becn1O88597 Gm10461-201ENSMUST00000202073 4786 ntBASIC21.32■■□□□ 1
Becn1O88597 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Becn1O88597 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Becn1O88597 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC21.31■■□□□ 1
Becn1O88597 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Becn1O88597 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Becn1O88597 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Becn1O88597 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Becn1O88597 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC21.31■■□□□ 1
Becn1O88597 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Becn1O88597 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Becn1O88597 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Becn1O88597 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Becn1O88597 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Becn1O88597 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Becn1O88597 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Becn1O88597 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Becn1O88597 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC21.3■■□□□ 1
Becn1O88597 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC21.3■■□□□ 1
Becn1O88597 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Becn1O88597 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC21.3■■□□□ 1
Becn1O88597 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC21.3■■□□□ 1
Becn1O88597 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC21.3■■□□□ 1
Becn1O88597 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC21.3■■□□□ 1
Becn1O88597 AC121598.2-201ENSMUST00000228376 2325 ntBASIC21.3■■□□□ 1
Becn1O88597 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Becn1O88597 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Becn1O88597 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Becn1O88597 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Becn1O88597 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC21.29■■□□□ 1
Becn1O88597 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC21.29■■□□□ 1
Becn1O88597 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC21.29■■□□□ 1
Becn1O88597 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC21.29■■□□□ 1
Becn1O88597 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC21.29■■□□□ 1
Becn1O88597 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC21.29■■□□□ 1
Becn1O88597 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Becn1O88597 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Becn1O88597 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Becn1O88597 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Becn1O88597 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Becn1O88597 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC21.29■■□□□ 1
Becn1O88597 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Becn1O88597 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Becn1O88597 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
Becn1O88597 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC21.28■■□□□ 1
Becn1O88597 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Becn1O88597 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
Becn1O88597 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Becn1O88597 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Becn1O88597 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC21.28■■□□□ 1
Becn1O88597 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Becn1O88597 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Becn1O88597 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC21.28■■□□□ 1
Becn1O88597 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Becn1O88597 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC21.28■■□□□ 1
Becn1O88597 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC21.27■■□□□ 1
Becn1O88597 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Becn1O88597 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC21.27■■□□□ 1
Becn1O88597 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC21.27■■□□□ 1
Becn1O88597 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC21.27■■□□□ 1
Becn1O88597 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Becn1O88597 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Becn1O88597 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC21.27■□□□□ 0.99
Becn1O88597 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Becn1O88597 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Becn1O88597 Shroom3-211ENSMUST00000225438 5742 ntBASIC21.26■□□□□ 0.99
Becn1O88597 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC21.26■□□□□ 0.99
Becn1O88597 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Becn1O88597 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC21.26■□□□□ 0.99
Becn1O88597 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
Becn1O88597 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Becn1O88597 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Becn1O88597 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms