Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
HCN1O60741 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.76■□□□□ 0.75
HCN1O60741 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
HCN1O60741 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HCN1O60741 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HCN1O60741 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
HCN1O60741 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.76■□□□□ 0.75
HCN1O60741 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.76■□□□□ 0.75
HCN1O60741 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.76■□□□□ 0.75
HCN1O60741 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.76■□□□□ 0.75
HCN1O60741 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
HCN1O60741 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HCN1O60741 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
HCN1O60741 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HCN1O60741 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HCN1O60741 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.75■□□□□ 0.75
HCN1O60741 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
HCN1O60741 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.75■□□□□ 0.75
HCN1O60741 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
HCN1O60741 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.75■□□□□ 0.75
HCN1O60741 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.75■□□□□ 0.75
HCN1O60741 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.75■□□□□ 0.75
HCN1O60741 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
HCN1O60741 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HCN1O60741 DUX4L2-201ENST00000561772 1275 ntBASIC19.75■□□□□ 0.75
HCN1O60741 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.75■□□□□ 0.75
HCN1O60741 CCDC92B-201ENST00000575506 885 ntBASIC19.75■□□□□ 0.75
HCN1O60741 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.75■□□□□ 0.75
HCN1O60741 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HCN1O60741 DUX4L6-201ENST00000626483 1275 ntBASIC19.75■□□□□ 0.75
HCN1O60741 DUX4L1-201ENST00000627662 1275 ntBASIC19.75■□□□□ 0.75
HCN1O60741 DUX4L8-201ENST00000629013 1275 ntBASIC19.75■□□□□ 0.75
HCN1O60741 DUX4L3-201ENST00000630187 1275 ntBASIC19.75■□□□□ 0.75
HCN1O60741 DUX4L7-201ENST00000630678 1275 ntBASIC19.75■□□□□ 0.75
HCN1O60741 DUX4L5-201ENST00000630834 1275 ntBASIC19.75■□□□□ 0.75
HCN1O60741 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HCN1O60741 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HCN1O60741 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.75■□□□□ 0.75
HCN1O60741 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
HCN1O60741 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HCN1O60741 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HCN1O60741 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
HCN1O60741 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.74■□□□□ 0.75
HCN1O60741 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HCN1O60741 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
HCN1O60741 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.74■□□□□ 0.75
HCN1O60741 TERF1P2-201ENST00000583350 1212 ntBASIC19.74■□□□□ 0.75
HCN1O60741 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.74■□□□□ 0.75
HCN1O60741 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HCN1O60741 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.74■□□□□ 0.75
HCN1O60741 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
HCN1O60741 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.74■□□□□ 0.75
HCN1O60741 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HCN1O60741 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HCN1O60741 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HCN1O60741 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HCN1O60741 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
HCN1O60741 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HCN1O60741 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
HCN1O60741 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
HCN1O60741 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HCN1O60741 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
HCN1O60741 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
HCN1O60741 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.73■□□□□ 0.75
HCN1O60741 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.73■□□□□ 0.75
HCN1O60741 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
HCN1O60741 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HCN1O60741 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.72■□□□□ 0.75
HCN1O60741 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HCN1O60741 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HCN1O60741 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HCN1O60741 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HCN1O60741 KRT18P5-201ENST00000436075 1291 ntBASIC19.72■□□□□ 0.75
HCN1O60741 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.72■□□□□ 0.75
HCN1O60741 KRT18P14-201ENST00000534205 1250 ntBASIC19.72■□□□□ 0.75
HCN1O60741 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.72■□□□□ 0.75
HCN1O60741 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HCN1O60741 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.72■□□□□ 0.75
HCN1O60741 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.72■□□□□ 0.75
HCN1O60741 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HCN1O60741 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
HCN1O60741 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.72■□□□□ 0.75
HCN1O60741 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.72■□□□□ 0.75
HCN1O60741 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HCN1O60741 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HCN1O60741 AL121603.2-201ENST00000557373 2117 ntBASIC19.72■□□□□ 0.75
HCN1O60741 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
HCN1O60741 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HCN1O60741 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
HCN1O60741 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.71■□□□□ 0.75
HCN1O60741 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HCN1O60741 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.71■□□□□ 0.75
HCN1O60741 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.71■□□□□ 0.75
HCN1O60741 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HCN1O60741 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
HCN1O60741 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
HCN1O60741 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HCN1O60741 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HCN1O60741 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HCN1O60741 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms