Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 KRT18P11-201ENST00000435214 1283 ntBASIC21.88■■□□□ 1.09
TSPAN3O60637 CDCA4P2-201ENST00000441182 718 ntBASIC21.88■■□□□ 1.09
TSPAN3O60637 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC21.88■■□□□ 1.09
TSPAN3O60637 AC053503.5-201ENST00000601508 636 ntBASIC21.88■■□□□ 1.09
TSPAN3O60637 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
TSPAN3O60637 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
TSPAN3O60637 FAM99A-202ENST00000538190 1989 ntBASIC21.88■■□□□ 1.09
TSPAN3O60637 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
TSPAN3O60637 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TSPAN3O60637 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TSPAN3O60637 GAS2L1P2-201ENST00000436355 1356 ntBASIC21.87■■□□□ 1.09
TSPAN3O60637 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TSPAN3O60637 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
TSPAN3O60637 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TSPAN3O60637 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
TSPAN3O60637 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC21.87■■□□□ 1.09
TSPAN3O60637 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
TSPAN3O60637 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TSPAN3O60637 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
TSPAN3O60637 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TSPAN3O60637 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
TSPAN3O60637 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC21.87■■□□□ 1.09
TSPAN3O60637 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
TSPAN3O60637 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.87■■□□□ 1.09
TSPAN3O60637 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
TSPAN3O60637 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TSPAN3O60637 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
TSPAN3O60637 AC242852.2-201ENST00000615738 1807 ntBASIC21.87■■□□□ 1.09
TSPAN3O60637 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TSPAN3O60637 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21.87■■□□□ 1.09
TSPAN3O60637 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.87■■□□□ 1.09
TSPAN3O60637 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
TSPAN3O60637 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.86■■□□□ 1.09
TSPAN3O60637 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.86■■□□□ 1.09
TSPAN3O60637 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
TSPAN3O60637 NAA20-201ENST00000310450 920 ntTSL 2 BASIC21.86■■□□□ 1.09
TSPAN3O60637 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC21.86■■□□□ 1.09
TSPAN3O60637 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC21.86■■□□□ 1.09
TSPAN3O60637 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
TSPAN3O60637 MFSD11-216ENST00000590393 1141 ntBASIC21.86■■□□□ 1.09
TSPAN3O60637 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
TSPAN3O60637 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TSPAN3O60637 AC010542.4-201ENST00000563151 1910 ntBASIC21.86■■□□□ 1.09
TSPAN3O60637 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
TSPAN3O60637 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.85■■□□□ 1.09
TSPAN3O60637 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
TSPAN3O60637 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
TSPAN3O60637 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
TSPAN3O60637 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
TSPAN3O60637 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.85■■□□□ 1.09
TSPAN3O60637 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.85■■□□□ 1.09
TSPAN3O60637 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TSPAN3O60637 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
TSPAN3O60637 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
TSPAN3O60637 SLC7A5P2-201ENST00000553010 536 ntBASIC21.85■■□□□ 1.09
TSPAN3O60637 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
TSPAN3O60637 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
TSPAN3O60637 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
TSPAN3O60637 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
TSPAN3O60637 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TSPAN3O60637 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TSPAN3O60637 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TSPAN3O60637 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TSPAN3O60637 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21.84■■□□□ 1.09
TSPAN3O60637 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
TSPAN3O60637 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TSPAN3O60637 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TSPAN3O60637 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC21.84■■□□□ 1.09
TSPAN3O60637 RNF146-206ENST00000480444 843 ntTSL 2 BASIC21.84■■□□□ 1.09
TSPAN3O60637 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC21.84■■□□□ 1.09
TSPAN3O60637 MYCNOS-205ENST00000641950 531 ntBASIC21.84■■□□□ 1.09
TSPAN3O60637 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
TSPAN3O60637 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
TSPAN3O60637 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
TSPAN3O60637 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
TSPAN3O60637 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
TSPAN3O60637 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
TSPAN3O60637 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
TSPAN3O60637 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TSPAN3O60637 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TSPAN3O60637 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TSPAN3O60637 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
TSPAN3O60637 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC21.83■■□□□ 1.09
TSPAN3O60637 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC21.83■■□□□ 1.09
TSPAN3O60637 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC21.83■■□□□ 1.09
TSPAN3O60637 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC21.83■■□□□ 1.09
TSPAN3O60637 RAP2CP1-201ENST00000605103 478 ntBASIC21.83■■□□□ 1.09
TSPAN3O60637 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.83■■□□□ 1.09
TSPAN3O60637 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
TSPAN3O60637 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.08
TSPAN3O60637 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.83■■□□□ 1.08
TSPAN3O60637 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
TSPAN3O60637 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
TSPAN3O60637 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
TSPAN3O60637 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
TSPAN3O60637 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
TSPAN3O60637 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TSPAN3O60637 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TSPAN3O60637 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TSPAN3O60637 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms