Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 LINC02228-203ENST00000641970 1355 ntBASIC19.19■□□□□ 0.66
SMAD9O15198 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.18■□□□□ 0.66
SMAD9O15198 AC009237.3-201ENST00000393279 1427 ntBASIC19.18■□□□□ 0.66
SMAD9O15198 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.18■□□□□ 0.66
SMAD9O15198 AC005224.4-201ENST00000583262 1652 ntBASIC19.18■□□□□ 0.66
SMAD9O15198 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.18■□□□□ 0.66
SMAD9O15198 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SMAD9O15198 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SMAD9O15198 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SMAD9O15198 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SMAD9O15198 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
SMAD9O15198 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.18■□□□□ 0.66
SMAD9O15198 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SMAD9O15198 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SMAD9O15198 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.18■□□□□ 0.66
SMAD9O15198 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
SMAD9O15198 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.18■□□□□ 0.66
SMAD9O15198 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.18■□□□□ 0.66
SMAD9O15198 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SMAD9O15198 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SMAD9O15198 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SMAD9O15198 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SMAD9O15198 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SMAD9O15198 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SMAD9O15198 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.17■□□□□ 0.66
SMAD9O15198 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
SMAD9O15198 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.17■□□□□ 0.66
SMAD9O15198 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMAD9O15198 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMAD9O15198 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SMAD9O15198 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.17■□□□□ 0.66
SMAD9O15198 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC19.17■□□□□ 0.66
SMAD9O15198 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.17■□□□□ 0.66
SMAD9O15198 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.17■□□□□ 0.66
SMAD9O15198 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.17■□□□□ 0.66
SMAD9O15198 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMAD9O15198 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
SMAD9O15198 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.17■□□□□ 0.66
SMAD9O15198 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SMAD9O15198 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
SMAD9O15198 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
SMAD9O15198 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SMAD9O15198 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SMAD9O15198 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.16■□□□□ 0.66
SMAD9O15198 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SMAD9O15198 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.16■□□□□ 0.66
SMAD9O15198 TERF1P2-201ENST00000583350 1212 ntBASIC19.16■□□□□ 0.66
SMAD9O15198 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.16■□□□□ 0.66
SMAD9O15198 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.16■□□□□ 0.66
SMAD9O15198 AC087623.3-201ENST00000607047 1098 ntBASIC19.16■□□□□ 0.66
SMAD9O15198 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SMAD9O15198 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SMAD9O15198 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SMAD9O15198 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SMAD9O15198 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.16■□□□□ 0.66
SMAD9O15198 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SMAD9O15198 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.16■□□□□ 0.66
SMAD9O15198 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SMAD9O15198 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SMAD9O15198 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SMAD9O15198 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SMAD9O15198 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
SMAD9O15198 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SMAD9O15198 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.15■□□□□ 0.66
SMAD9O15198 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
SMAD9O15198 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
SMAD9O15198 CCDC92B-201ENST00000575506 885 ntBASIC19.15■□□□□ 0.66
SMAD9O15198 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.15■□□□□ 0.66
SMAD9O15198 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC19.15■□□□□ 0.66
SMAD9O15198 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
SMAD9O15198 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SMAD9O15198 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SMAD9O15198 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
SMAD9O15198 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SMAD9O15198 AP006587.3-201ENST00000525742 1516 ntBASIC19.15■□□□□ 0.66
SMAD9O15198 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
SMAD9O15198 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
SMAD9O15198 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SMAD9O15198 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SMAD9O15198 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.14■□□□□ 0.65
SMAD9O15198 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SMAD9O15198 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SMAD9O15198 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SMAD9O15198 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SMAD9O15198 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SMAD9O15198 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
SMAD9O15198 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.14■□□□□ 0.65
SMAD9O15198 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SMAD9O15198 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SMAD9O15198 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SMAD9O15198 AC055733.4-201ENST00000638462 1354 ntBASIC19.14■□□□□ 0.65
SMAD9O15198 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
SMAD9O15198 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SMAD9O15198 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SMAD9O15198 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SMAD9O15198 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SMAD9O15198 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.13■□□□□ 0.65
SMAD9O15198 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SMAD9O15198 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SMAD9O15198 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms