Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TCRBV4S1A1TA0A5B7 AC010141.3-201ENST00000456659 717 ntBASIC17.03■□□□□ 0.32
TCRBV4S1A1TA0A5B7 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC17.03■□□□□ 0.32
TCRBV4S1A1TA0A5B7 AC022517.1-201ENST00000592429 346 ntBASIC17.03■□□□□ 0.32
TCRBV4S1A1TA0A5B7 AL137784.2-201ENST00000607332 1000 ntBASIC17.03■□□□□ 0.32
TCRBV4S1A1TA0A5B7 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC17.03■□□□□ 0.32
TCRBV4S1A1TA0A5B7 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TCRBV4S1A1TA0A5B7 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC17.03■□□□□ 0.32
TCRBV4S1A1TA0A5B7 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC17.03■□□□□ 0.32
TCRBV4S1A1TA0A5B7 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TCRBV4S1A1TA0A5B7 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TCRBV4S1A1TA0A5B7 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC17.03■□□□□ 0.32
TCRBV4S1A1TA0A5B7 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
TCRBV4S1A1TA0A5B7 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
TCRBV4S1A1TA0A5B7 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC17.02■□□□□ 0.32
TCRBV4S1A1TA0A5B7 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TCRBV4S1A1TA0A5B7 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TCRBV4S1A1TA0A5B7 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TCRBV4S1A1TA0A5B7 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TCRBV4S1A1TA0A5B7 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TCRBV4S1A1TA0A5B7 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TCRBV4S1A1TA0A5B7 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC17.02■□□□□ 0.32
TCRBV4S1A1TA0A5B7 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC17.02■□□□□ 0.32
TCRBV4S1A1TA0A5B7 NTF6G-201ENST00000591094 616 ntBASIC17.02■□□□□ 0.32
TCRBV4S1A1TA0A5B7 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC17.02■□□□□ 0.32
TCRBV4S1A1TA0A5B7 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
TCRBV4S1A1TA0A5B7 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC17.02■□□□□ 0.32
TCRBV4S1A1TA0A5B7 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
TCRBV4S1A1TA0A5B7 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC17.02■□□□□ 0.31
TCRBV4S1A1TA0A5B7 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TCRBV4S1A1TA0A5B7 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TCRBV4S1A1TA0A5B7 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC17.01■□□□□ 0.31
TCRBV4S1A1TA0A5B7 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC17.01■□□□□ 0.31
TCRBV4S1A1TA0A5B7 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TCRBV4S1A1TA0A5B7 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TCRBV4S1A1TA0A5B7 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TCRBV4S1A1TA0A5B7 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
TCRBV4S1A1TA0A5B7 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC17.01■□□□□ 0.31
TCRBV4S1A1TA0A5B7 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TCRBV4S1A1TA0A5B7 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TCRBV4S1A1TA0A5B7 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TCRBV4S1A1TA0A5B7 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC17.01■□□□□ 0.31
TCRBV4S1A1TA0A5B7 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
TCRBV4S1A1TA0A5B7 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TCRBV4S1A1TA0A5B7 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
TCRBV4S1A1TA0A5B7 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC17.01■□□□□ 0.31
TCRBV4S1A1TA0A5B7 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
TCRBV4S1A1TA0A5B7 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TCRBV4S1A1TA0A5B7 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TCRBV4S1A1TA0A5B7 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC17.01■□□□□ 0.31
TCRBV4S1A1TA0A5B7 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TCRBV4S1A1TA0A5B7 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC17.01■□□□□ 0.31
TCRBV4S1A1TA0A5B7 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TCRBV4S1A1TA0A5B7 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TCRBV4S1A1TA0A5B7 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TCRBV4S1A1TA0A5B7 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
TCRBV4S1A1TA0A5B7 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC17■□□□□ 0.31
TCRBV4S1A1TA0A5B7 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
TCRBV4S1A1TA0A5B7 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TCRBV4S1A1TA0A5B7 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TCRBV4S1A1TA0A5B7 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TCRBV4S1A1TA0A5B7 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC17■□□□□ 0.31
TCRBV4S1A1TA0A5B7 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC17■□□□□ 0.31
TCRBV4S1A1TA0A5B7 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC17■□□□□ 0.31
TCRBV4S1A1TA0A5B7 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC17■□□□□ 0.31
TCRBV4S1A1TA0A5B7 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
TCRBV4S1A1TA0A5B7 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC17■□□□□ 0.31
TCRBV4S1A1TA0A5B7 TERF1P2-201ENST00000583350 1212 ntBASIC17■□□□□ 0.31
TCRBV4S1A1TA0A5B7 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TCRBV4S1A1TA0A5B7 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
TCRBV4S1A1TA0A5B7 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TCRBV4S1A1TA0A5B7 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TCRBV4S1A1TA0A5B7 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC17■□□□□ 0.31
TCRBV4S1A1TA0A5B7 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC17■□□□□ 0.31
TCRBV4S1A1TA0A5B7 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
TCRBV4S1A1TA0A5B7 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TCRBV4S1A1TA0A5B7 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TCRBV4S1A1TA0A5B7 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TCRBV4S1A1TA0A5B7 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TCRBV4S1A1TA0A5B7 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TCRBV4S1A1TA0A5B7 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC16.99■□□□□ 0.31
TCRBV4S1A1TA0A5B7 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
TCRBV4S1A1TA0A5B7 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TCRBV4S1A1TA0A5B7 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TCRBV4S1A1TA0A5B7 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TCRBV4S1A1TA0A5B7 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
TCRBV4S1A1TA0A5B7 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TCRBV4S1A1TA0A5B7 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC16.99■□□□□ 0.31
TCRBV4S1A1TA0A5B7 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC16.99■□□□□ 0.31
TCRBV4S1A1TA0A5B7 IKBKGP1-201ENST00000612193 1073 ntBASIC16.99■□□□□ 0.31
TCRBV4S1A1TA0A5B7 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TCRBV4S1A1TA0A5B7 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TCRBV4S1A1TA0A5B7 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TCRBV4S1A1TA0A5B7 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
TCRBV4S1A1TA0A5B7 AC244015.2-201ENST00000616358 1861 ntBASIC16.99■□□□□ 0.31
TCRBV4S1A1TA0A5B7 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
TCRBV4S1A1TA0A5B7 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC16.99■□□□□ 0.31
TCRBV4S1A1TA0A5B7 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC16.98■□□□□ 0.31
TCRBV4S1A1TA0A5B7 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TCRBV4S1A1TA0A5B7 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms