Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 CASP8AP2-205ENST00000551025 6151 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LMO3Q8TAP4 NUMA1-205ENST00000393695 7343 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
LMO3Q8TAP4 GNL1-201ENST00000376621 7490 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LMO3Q8TAP4 AC137932.3-201ENST00000602042 3660 ntTSL 2 BASIC11.83□□□□□ -0.52
LMO3Q8TAP4 C22orf15-201ENST00000305199 681 ntAPPRIS ALT2 TSL 3 BASIC11.83□□□□□ -0.52
LMO3Q8TAP4 HIGD2B-201ENST00000311755 1116 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LMO3Q8TAP4 AC017104.3-201ENST00000370380 568 ntTSL 4 BASIC11.83□□□□□ -0.52
LMO3Q8TAP4 CHCHD2P4-201ENST00000418701 434 ntBASIC11.83□□□□□ -0.52
LMO3Q8TAP4 LINC00271-202ENST00000436554 655 ntTSL 5 BASIC11.83□□□□□ -0.52
LMO3Q8TAP4 CNBP-202ENST00000441626 1040 ntTSL 2 BASIC11.83□□□□□ -0.52
LMO3Q8TAP4 KIZ-AS1-202ENST00000443753 1161 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
LMO3Q8TAP4 AL360268.1-201ENST00000453870 765 ntTSL 3 BASIC11.83□□□□□ -0.52
LMO3Q8TAP4 PIK3CDP1-201ENST00000454229 922 ntBASIC11.83□□□□□ -0.52
LMO3Q8TAP4 PAQR9-AS1-203ENST00000497652 516 ntTSL 3 BASIC11.83□□□□□ -0.52
LMO3Q8TAP4 LINC01377-201ENST00000505396 649 ntTSL 2 BASIC11.83□□□□□ -0.52
LMO3Q8TAP4 HINT1-208ENST00000513012 583 ntTSL 4 BASIC11.83□□□□□ -0.52
LMO3Q8TAP4 IGHV1-68-201ENST00000519437 352 ntBASIC11.83□□□□□ -0.52
LMO3Q8TAP4 STMN4-206ENST00000522908 1004 ntTSL 2 BASIC11.83□□□□□ -0.52
LMO3Q8TAP4 AC073578.1-201ENST00000535133 493 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
LMO3Q8TAP4 AL355075.5-201ENST00000553568 890 ntBASIC11.83□□□□□ -0.52
LMO3Q8TAP4 LINC00929-202ENST00000556159 1169 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
LMO3Q8TAP4 AC126773.3-201ENST00000562089 893 ntBASIC11.83□□□□□ -0.52
LMO3Q8TAP4 AC116348.3-201ENST00000569459 699 ntTSL 3 BASIC11.83□□□□□ -0.52
LMO3Q8TAP4 SNRPN-208ENST00000577565 1298 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
LMO3Q8TAP4 AC245884.8-201ENST00000599382 880 ntBASIC11.83□□□□□ -0.52
LMO3Q8TAP4 ZNF415-221ENST00000600574 563 ntTSL 3 BASIC11.83□□□□□ -0.52
LMO3Q8TAP4 AC025287.3-201ENST00000611726 501 ntBASIC11.83□□□□□ -0.52
LMO3Q8TAP4 SNORD3D-201ENST00000619178 218 ntBASIC11.83□□□□□ -0.52
LMO3Q8TAP4 AC092329.4-211ENST00000638919 579 ntTSL 2 BASIC11.83□□□□□ -0.52
LMO3Q8TAP4 AC092329.4-203ENST00000639752 556 ntTSL 4 BASIC11.83□□□□□ -0.52
LMO3Q8TAP4 AC092329.4-201ENST00000640838 583 ntTSL 4 BASIC11.83□□□□□ -0.52
LMO3Q8TAP4 TTC23-201ENST00000262074 3316 ntTSL 5 BASIC11.83□□□□□ -0.52
LMO3Q8TAP4 PLB1-205ENST00000422425 5115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
LMO3Q8TAP4 WASF1-204ENST00000392586 2815 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
LMO3Q8TAP4 TIFAB-201ENST00000537858 5923 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LMO3Q8TAP4 SEC61A1-202ENST00000424880 3238 ntTSL 2 BASIC11.83□□□□□ -0.52
LMO3Q8TAP4 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
LMO3Q8TAP4 SERPINE3-203ENST00000521255 1439 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
LMO3Q8TAP4 MX1-201ENST00000288383 2733 ntTSL 2 BASIC11.83□□□□□ -0.52
LMO3Q8TAP4 SLIT2-204ENST00000504154 6390 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LMO3Q8TAP4 ACAN-203ENST00000558207 4159 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
LMO3Q8TAP4 CCDC40-203ENST00000374877 3544 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
LMO3Q8TAP4 AC019322.4-201ENST00000623470 3930 ntBASIC11.83□□□□□ -0.52
LMO3Q8TAP4 AC068448.1-201ENST00000623902 3925 ntBASIC11.83□□□□□ -0.52
LMO3Q8TAP4 TRPC4-206ENST00000379705 4059 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LMO3Q8TAP4 ARHGAP44-201ENST00000262444 3001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
LMO3Q8TAP4 TEX2-204ENST00000583097 4852 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LMO3Q8TAP4 TEX2-210ENST00000615733 4852 ntAPPRIS ALT1 TSL 5 BASIC11.83□□□□□ -0.52
LMO3Q8TAP4 AC022915.2-201ENST00000522575 2372 ntTSL 2 BASIC11.83□□□□□ -0.52
LMO3Q8TAP4 AC010729.1-201ENST00000413960 1746 ntTSL 3 BASIC11.83□□□□□ -0.52
LMO3Q8TAP4 ICOS-202ENST00000435193 2528 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
LMO3Q8TAP4 INSC-203ENST00000424273 2943 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
LMO3Q8TAP4 LARS2-202ENST00000414984 2800 ntTSL 5 BASIC11.82□□□□□ -0.52
LMO3Q8TAP4 SSU72-202ENST00000359060 4176 ntTSL 2 BASIC11.82□□□□□ -0.52
LMO3Q8TAP4 PTPRR-201ENST00000283228 3529 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
LMO3Q8TAP4 WHRN-204ENST00000374059 3278 ntTSL 2 BASIC11.82□□□□□ -0.52
LMO3Q8TAP4 ZNF98-201ENST00000357774 2338 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LMO3Q8TAP4 CFB-271ENST00000425368 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LMO3Q8TAP4 NME9-201ENST00000317876 1930 ntTSL 5 BASIC11.82□□□□□ -0.52
LMO3Q8TAP4 UPK1B-202ENST00000460625 1937 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
LMO3Q8TAP4 PCID2-216ENST00000622406 1937 ntTSL 5 BASIC11.82□□□□□ -0.52
LMO3Q8TAP4 AC102797.2-201ENST00000625076 1935 ntBASIC11.82□□□□□ -0.52
LMO3Q8TAP4 CRISPLD2-201ENST00000262424 4586 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
LMO3Q8TAP4 DEPDC1-201ENST00000370966 4586 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LMO3Q8TAP4 C12orf77-203ENST00000623395 1516 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
LMO3Q8TAP4 LILRB1-206ENST00000396332 2776 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
LMO3Q8TAP4 ACRV1-204ENST00000533904 2212 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
LMO3Q8TAP4 MYO5B-207ENST00000592688 1693 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
LMO3Q8TAP4 RGS3-203ENST00000343817 3689 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
LMO3Q8TAP4 LUADT1-201ENST00000359838 453 ntTSL 5 BASIC11.82□□□□□ -0.52
LMO3Q8TAP4 FLAD1-204ENST00000368428 1111 ntTSL 3 BASIC11.82□□□□□ -0.52
LMO3Q8TAP4 PABPC5-202ENST00000373105 1262 ntTSL 2 BASIC11.82□□□□□ -0.52
LMO3Q8TAP4 GOLGA6B-201ENST00000421285 2134 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LMO3Q8TAP4 BET1-205ENST00000433727 1031 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
LMO3Q8TAP4 PGAM1P2-201ENST00000436071 725 ntBASIC11.82□□□□□ -0.52
LMO3Q8TAP4 AC008940.1-201ENST00000438117 785 ntTSL 5 BASIC11.82□□□□□ -0.52
LMO3Q8TAP4 AL731547.1-201ENST00000457930 389 ntBASIC11.82□□□□□ -0.52
LMO3Q8TAP4 AC007849.2-201ENST00000484597 471 ntBASIC11.82□□□□□ -0.52
LMO3Q8TAP4 RN7SL87P-201ENST00000497657 288 ntBASIC11.82□□□□□ -0.52
LMO3Q8TAP4 BRCC3P1-201ENST00000508559 951 ntBASIC11.82□□□□□ -0.52
LMO3Q8TAP4 RN7SL260P-201ENST00000521103 282 ntBASIC11.82□□□□□ -0.52
LMO3Q8TAP4 AP001533.1-201ENST00000526107 546 ntBASIC11.82□□□□□ -0.52
LMO3Q8TAP4 MIR200CHG-201ENST00000537269 350 ntTSL 2 BASIC11.82□□□□□ -0.52
LMO3Q8TAP4 AC068722.1-201ENST00000560705 861 ntTSL 3 BASIC11.82□□□□□ -0.52
LMO3Q8TAP4 SNRPCP4-201ENST00000583992 427 ntBASIC11.82□□□□□ -0.52
LMO3Q8TAP4 SMIM22-204ENST00000588606 394 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
LMO3Q8TAP4 INTS9-213ENST00000521777 2430 ntTSL 2 BASIC11.82□□□□□ -0.52
LMO3Q8TAP4 RAD9B-205ENST00000409425 2727 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
LMO3Q8TAP4 NFE2L2-211ENST00000464747 2749 ntTSL 2 BASIC11.82□□□□□ -0.52
LMO3Q8TAP4 KIF2C-202ENST00000372224 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LMO3Q8TAP4 AC105429.1-201ENST00000612833 4001 ntBASIC11.82□□□□□ -0.52
LMO3Q8TAP4 GNPDA1-202ENST00000500692 2319 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
LMO3Q8TAP4 NR4A1-206ENST00000545748 3511 ntTSL 2 BASIC11.82□□□□□ -0.52
LMO3Q8TAP4 AC087235.1-201ENST00000538297 1329 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
LMO3Q8TAP4 GRK1-201ENST00000335678 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LMO3Q8TAP4 HORMAD1-204ENST00000368995 1794 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
LMO3Q8TAP4 TEKT3-202ENST00000395930 1785 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LMO3Q8TAP4 ILK-202ENST00000396751 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LMO3Q8TAP4 GSG1-201ENST00000337630 2390 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
LMO3Q8TAP4 PIGN-222ENST00000638329 2367 ntTSL 5 BASIC11.82□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms