Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
PCDHGA11Q9Y5H2 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.59■□□□□ 0.89
PCDHGA11Q9Y5H2 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.59■□□□□ 0.89
PCDHGA11Q9Y5H2 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHGA11Q9Y5H2 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
PCDHGA11Q9Y5H2 AC026471.6-201ENST00000622954 1905 ntBASIC20.59■□□□□ 0.89
PCDHGA11Q9Y5H2 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHGA11Q9Y5H2 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHGA11Q9Y5H2 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHGA11Q9Y5H2 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHGA11Q9Y5H2 AL139246.5-201ENST00000606645 996 ntBASIC20.59■□□□□ 0.89
PCDHGA11Q9Y5H2 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.59■□□□□ 0.89
PCDHGA11Q9Y5H2 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.59■□□□□ 0.89
PCDHGA11Q9Y5H2 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHGA11Q9Y5H2 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHGA11Q9Y5H2 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
PCDHGA11Q9Y5H2 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.58■□□□□ 0.89
PCDHGA11Q9Y5H2 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
PCDHGA11Q9Y5H2 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PCDHGA11Q9Y5H2 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
PCDHGA11Q9Y5H2 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PCDHGA11Q9Y5H2 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PCDHGA11Q9Y5H2 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PCDHGA11Q9Y5H2 MIR939-201ENST00000401314 82 ntBASIC20.58■□□□□ 0.89
PCDHGA11Q9Y5H2 AC091305.1-201ENST00000479476 895 ntBASIC20.58■□□□□ 0.89
PCDHGA11Q9Y5H2 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.58■□□□□ 0.89
PCDHGA11Q9Y5H2 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.58■□□□□ 0.88
PCDHGA11Q9Y5H2 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
PCDHGA11Q9Y5H2 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
PCDHGA11Q9Y5H2 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHGA11Q9Y5H2 TSPY26P-201ENST00000476365 1326 ntBASIC20.57■□□□□ 0.88
PCDHGA11Q9Y5H2 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.57■□□□□ 0.88
PCDHGA11Q9Y5H2 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHGA11Q9Y5H2 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.57■□□□□ 0.88
PCDHGA11Q9Y5H2 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHGA11Q9Y5H2 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.57■□□□□ 0.88
PCDHGA11Q9Y5H2 AF213884.3-201ENST00000563833 479 ntBASIC20.57■□□□□ 0.88
PCDHGA11Q9Y5H2 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.57■□□□□ 0.88
PCDHGA11Q9Y5H2 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHGA11Q9Y5H2 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHGA11Q9Y5H2 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHGA11Q9Y5H2 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHGA11Q9Y5H2 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
PCDHGA11Q9Y5H2 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHGA11Q9Y5H2 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHGA11Q9Y5H2 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHGA11Q9Y5H2 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
PCDHGA11Q9Y5H2 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.56■□□□□ 0.88
PCDHGA11Q9Y5H2 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHGA11Q9Y5H2 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
PCDHGA11Q9Y5H2 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHGA11Q9Y5H2 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
PCDHGA11Q9Y5H2 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHGA11Q9Y5H2 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHGA11Q9Y5H2 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHGA11Q9Y5H2 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.56■□□□□ 0.88
PCDHGA11Q9Y5H2 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.56■□□□□ 0.88
PCDHGA11Q9Y5H2 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
PCDHGA11Q9Y5H2 AL136967.2-201ENST00000623968 743 ntBASIC20.56■□□□□ 0.88
PCDHGA11Q9Y5H2 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHGA11Q9Y5H2 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHGA11Q9Y5H2 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHGA11Q9Y5H2 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHGA11Q9Y5H2 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHGA11Q9Y5H2 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHGA11Q9Y5H2 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHGA11Q9Y5H2 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHGA11Q9Y5H2 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHGA11Q9Y5H2 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.56■□□□□ 0.88
PCDHGA11Q9Y5H2 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHGA11Q9Y5H2 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHGA11Q9Y5H2 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHGA11Q9Y5H2 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.55■□□□□ 0.88
PCDHGA11Q9Y5H2 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
PCDHGA11Q9Y5H2 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
PCDHGA11Q9Y5H2 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHGA11Q9Y5H2 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.55■□□□□ 0.88
PCDHGA11Q9Y5H2 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.55■□□□□ 0.88
PCDHGA11Q9Y5H2 AL031432.3-201ENST00000607698 485 ntBASIC20.55■□□□□ 0.88
PCDHGA11Q9Y5H2 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHGA11Q9Y5H2 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.55■□□□□ 0.88
PCDHGA11Q9Y5H2 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHGA11Q9Y5H2 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.55■□□□□ 0.88
PCDHGA11Q9Y5H2 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHGA11Q9Y5H2 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.54■□□□□ 0.88
PCDHGA11Q9Y5H2 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHGA11Q9Y5H2 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHGA11Q9Y5H2 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.54■□□□□ 0.88
PCDHGA11Q9Y5H2 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHGA11Q9Y5H2 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
PCDHGA11Q9Y5H2 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHGA11Q9Y5H2 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHGA11Q9Y5H2 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHGA11Q9Y5H2 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHGA11Q9Y5H2 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHGA11Q9Y5H2 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.54■□□□□ 0.88
PCDHGA11Q9Y5H2 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
PCDHGA11Q9Y5H2 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.53■□□□□ 0.88
PCDHGA11Q9Y5H2 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHGA11Q9Y5H2 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms