Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
MACF1Q9UPN3 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
MACF1Q9UPN3 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
MACF1Q9UPN3 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
MACF1Q9UPN3 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
MACF1Q9UPN3 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC8.94□□□□□ -0.98
MACF1Q9UPN3 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
MACF1Q9UPN3 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
MACF1Q9UPN3 LY6E-205ENST00000519611 635 ntTSL 3 BASIC8.94□□□□□ -0.98
MACF1Q9UPN3 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC8.94□□□□□ -0.98
MACF1Q9UPN3 RARRES2P10-201ENST00000564312 460 ntBASIC8.94□□□□□ -0.98
MACF1Q9UPN3 CLN6-204ENST00000564752 900 ntTSL 3 BASIC8.94□□□□□ -0.98
MACF1Q9UPN3 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC8.94□□□□□ -0.98
MACF1Q9UPN3 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
MACF1Q9UPN3 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC8.93□□□□□ -0.98
MACF1Q9UPN3 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
MACF1Q9UPN3 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
MACF1Q9UPN3 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
MACF1Q9UPN3 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
MACF1Q9UPN3 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC8.93□□□□□ -0.98
MACF1Q9UPN3 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC8.93□□□□□ -0.98
MACF1Q9UPN3 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC8.93□□□□□ -0.98
MACF1Q9UPN3 AL671883.3-201ENST00000603274 991 ntBASIC8.93□□□□□ -0.98
MACF1Q9UPN3 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC8.93□□□□□ -0.98
MACF1Q9UPN3 DUSP8P5-201ENST00000422884 1815 ntBASIC8.93□□□□□ -0.98
MACF1Q9UPN3 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC8.93□□□□□ -0.98
MACF1Q9UPN3 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
MACF1Q9UPN3 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.98
MACF1Q9UPN3 AC104076.2-201ENST00000448912 469 ntBASIC8.93□□□□□ -0.98
MACF1Q9UPN3 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC8.93□□□□□ -0.98
MACF1Q9UPN3 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC8.93□□□□□ -0.98
MACF1Q9UPN3 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC8.93□□□□□ -0.98
MACF1Q9UPN3 AC005224.4-201ENST00000583262 1652 ntBASIC8.93□□□□□ -0.98
MACF1Q9UPN3 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
MACF1Q9UPN3 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC8.93□□□□□ -0.98
MACF1Q9UPN3 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC8.93□□□□□ -0.98
MACF1Q9UPN3 SLC29A4P2-201ENST00000504749 1089 ntBASIC8.93□□□□□ -0.98
MACF1Q9UPN3 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC8.93□□□□□ -0.98
MACF1Q9UPN3 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
MACF1Q9UPN3 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
MACF1Q9UPN3 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
MACF1Q9UPN3 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC8.93□□□□□ -0.98
MACF1Q9UPN3 HMGN1P19-201ENST00000436976 333 ntBASIC8.93□□□□□ -0.98
MACF1Q9UPN3 AC022616.7-201ENST00000525383 220 ntBASIC8.93□□□□□ -0.98
MACF1Q9UPN3 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC8.93□□□□□ -0.98
MACF1Q9UPN3 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
MACF1Q9UPN3 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC8.93□□□□□ -0.98
MACF1Q9UPN3 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC8.93□□□□□ -0.98
MACF1Q9UPN3 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
MACF1Q9UPN3 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
MACF1Q9UPN3 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC8.92□□□□□ -0.98
MACF1Q9UPN3 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC8.92□□□□□ -0.98
MACF1Q9UPN3 KRT8P10-201ENST00000450021 1447 ntBASIC8.92□□□□□ -0.98
MACF1Q9UPN3 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
MACF1Q9UPN3 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC8.92□□□□□ -0.98
MACF1Q9UPN3 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
MACF1Q9UPN3 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC8.92□□□□□ -0.98
MACF1Q9UPN3 SLC25A3P1-201ENST00000443844 931 ntBASIC8.92□□□□□ -0.98
MACF1Q9UPN3 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC8.92□□□□□ -0.98
MACF1Q9UPN3 CLN6-214ENST00000636314 442 ntTSL 3 BASIC8.92□□□□□ -0.98
MACF1Q9UPN3 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
MACF1Q9UPN3 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC8.92□□□□□ -0.98
MACF1Q9UPN3 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
MACF1Q9UPN3 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC8.92□□□□□ -0.98
MACF1Q9UPN3 CD37-213ENST00000598095 1598 ntTSL 2 BASIC8.92□□□□□ -0.98
MACF1Q9UPN3 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
MACF1Q9UPN3 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
MACF1Q9UPN3 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
MACF1Q9UPN3 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC8.92□□□□□ -0.98
MACF1Q9UPN3 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC8.92□□□□□ -0.98
MACF1Q9UPN3 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
MACF1Q9UPN3 PXK-203ENST00000383715 1756 ntTSL 5 BASIC8.92□□□□□ -0.98
MACF1Q9UPN3 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC8.92□□□□□ -0.98
MACF1Q9UPN3 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
MACF1Q9UPN3 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC8.92□□□□□ -0.98
MACF1Q9UPN3 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC8.92□□□□□ -0.98
MACF1Q9UPN3 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC8.92□□□□□ -0.98
MACF1Q9UPN3 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
MACF1Q9UPN3 CYP2D8P-201ENST00000433633 1490 ntBASIC8.92□□□□□ -0.98
MACF1Q9UPN3 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC8.92□□□□□ -0.98
MACF1Q9UPN3 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
MACF1Q9UPN3 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC8.91□□□□□ -0.98
MACF1Q9UPN3 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
MACF1Q9UPN3 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC8.91□□□□□ -0.98
MACF1Q9UPN3 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
MACF1Q9UPN3 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC8.91□□□□□ -0.98
MACF1Q9UPN3 OXCT2P1-201ENST00000447263 1535 ntBASIC8.91□□□□□ -0.98
MACF1Q9UPN3 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
MACF1Q9UPN3 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
MACF1Q9UPN3 COPE-203ENST00000351079 907 ntTSL 2 BASIC8.91□□□□□ -0.98
MACF1Q9UPN3 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
MACF1Q9UPN3 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC8.91□□□□□ -0.98
MACF1Q9UPN3 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC8.91□□□□□ -0.98
MACF1Q9UPN3 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC8.91□□□□□ -0.98
MACF1Q9UPN3 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC8.91□□□□□ -0.98
MACF1Q9UPN3 AL023875.1-201ENST00000640777 796 ntBASIC8.91□□□□□ -0.98
MACF1Q9UPN3 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
MACF1Q9UPN3 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
MACF1Q9UPN3 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
MACF1Q9UPN3 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms