Protein–RNA interactions for Protein: Q9R1Q9

Atp6ap1, V-type proton ATPase subunit S1, mousemouse

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6ap1Q9R1Q9 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Atp6ap1Q9R1Q9 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
Atp6ap1Q9R1Q9 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Atp6ap1Q9R1Q9 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.32■□□□□ 0.52
Atp6ap1Q9R1Q9 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Atp6ap1Q9R1Q9 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Atp6ap1Q9R1Q9 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Atp6ap1Q9R1Q9 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Atp6ap1Q9R1Q9 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Atp6ap1Q9R1Q9 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Atp6ap1Q9R1Q9 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Atp6ap1Q9R1Q9 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Atp6ap1Q9R1Q9 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Atp6ap1Q9R1Q9 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Atp6ap1Q9R1Q9 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.32■□□□□ 0.52
Atp6ap1Q9R1Q9 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC18.32■□□□□ 0.52
Atp6ap1Q9R1Q9 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Atp6ap1Q9R1Q9 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Atp6ap1Q9R1Q9 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Atp6ap1Q9R1Q9 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Atp6ap1Q9R1Q9 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Atp6ap1Q9R1Q9 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Atp6ap1Q9R1Q9 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Atp6ap1Q9R1Q9 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Atp6ap1Q9R1Q9 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Atp6ap1Q9R1Q9 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC18.31■□□□□ 0.52
Atp6ap1Q9R1Q9 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC18.31■□□□□ 0.52
Atp6ap1Q9R1Q9 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Atp6ap1Q9R1Q9 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Atp6ap1Q9R1Q9 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Atp6ap1Q9R1Q9 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Atp6ap1Q9R1Q9 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Atp6ap1Q9R1Q9 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Atp6ap1Q9R1Q9 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Atp6ap1Q9R1Q9 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Atp6ap1Q9R1Q9 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Atp6ap1Q9R1Q9 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Atp6ap1Q9R1Q9 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.3■□□□□ 0.52
Atp6ap1Q9R1Q9 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Atp6ap1Q9R1Q9 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Atp6ap1Q9R1Q9 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Atp6ap1Q9R1Q9 Gm13534-201ENSMUST00000121169 513 ntBASIC18.3■□□□□ 0.52
Atp6ap1Q9R1Q9 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Atp6ap1Q9R1Q9 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
Atp6ap1Q9R1Q9 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Atp6ap1Q9R1Q9 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Atp6ap1Q9R1Q9 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Atp6ap1Q9R1Q9 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Atp6ap1Q9R1Q9 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Atp6ap1Q9R1Q9 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Atp6ap1Q9R1Q9 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Atp6ap1Q9R1Q9 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Atp6ap1Q9R1Q9 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Atp6ap1Q9R1Q9 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Atp6ap1Q9R1Q9 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Atp6ap1Q9R1Q9 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Atp6ap1Q9R1Q9 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Atp6ap1Q9R1Q9 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Atp6ap1Q9R1Q9 AV356131-201ENSMUST00000206201 750 ntBASIC18.29■□□□□ 0.52
Atp6ap1Q9R1Q9 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Atp6ap1Q9R1Q9 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Atp6ap1Q9R1Q9 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.29■□□□□ 0.52
Atp6ap1Q9R1Q9 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Atp6ap1Q9R1Q9 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Atp6ap1Q9R1Q9 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Atp6ap1Q9R1Q9 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.28■□□□□ 0.52
Atp6ap1Q9R1Q9 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Atp6ap1Q9R1Q9 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
Atp6ap1Q9R1Q9 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Atp6ap1Q9R1Q9 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Atp6ap1Q9R1Q9 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Atp6ap1Q9R1Q9 Ap3s1-204ENSMUST00000225520 957 ntBASIC18.28■□□□□ 0.52
Atp6ap1Q9R1Q9 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Atp6ap1Q9R1Q9 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Atp6ap1Q9R1Q9 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Atp6ap1Q9R1Q9 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Atp6ap1Q9R1Q9 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Atp6ap1Q9R1Q9 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Atp6ap1Q9R1Q9 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Atp6ap1Q9R1Q9 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Atp6ap1Q9R1Q9 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Atp6ap1Q9R1Q9 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Atp6ap1Q9R1Q9 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.27■□□□□ 0.52
Atp6ap1Q9R1Q9 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Atp6ap1Q9R1Q9 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Atp6ap1Q9R1Q9 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Atp6ap1Q9R1Q9 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Atp6ap1Q9R1Q9 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Atp6ap1Q9R1Q9 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Atp6ap1Q9R1Q9 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Atp6ap1Q9R1Q9 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.51
Atp6ap1Q9R1Q9 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Atp6ap1Q9R1Q9 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Atp6ap1Q9R1Q9 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC18.27■□□□□ 0.51
Atp6ap1Q9R1Q9 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.27■□□□□ 0.51
Atp6ap1Q9R1Q9 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
Atp6ap1Q9R1Q9 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.26■□□□□ 0.51
Atp6ap1Q9R1Q9 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Atp6ap1Q9R1Q9 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Atp6ap1Q9R1Q9 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms