Protein–RNA interactions for Protein: Q9NUD5

ZCCHC3, Zinc finger CCHC domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC3Q9NUD5 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.98■□□□□ 0.79
ZCCHC3Q9NUD5 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.97■□□□□ 0.79
ZCCHC3Q9NUD5 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
ZCCHC3Q9NUD5 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ZCCHC3Q9NUD5 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
ZCCHC3Q9NUD5 AF213884.3-201ENST00000563833 479 ntBASIC19.97■□□□□ 0.79
ZCCHC3Q9NUD5 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
ZCCHC3Q9NUD5 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.97■□□□□ 0.79
ZCCHC3Q9NUD5 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.97■□□□□ 0.79
ZCCHC3Q9NUD5 AP006587.3-201ENST00000525742 1516 ntBASIC19.97■□□□□ 0.79
ZCCHC3Q9NUD5 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ZCCHC3Q9NUD5 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ZCCHC3Q9NUD5 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ZCCHC3Q9NUD5 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
ZCCHC3Q9NUD5 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.96■□□□□ 0.79
ZCCHC3Q9NUD5 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
ZCCHC3Q9NUD5 AC003102.1-202ENST00000563394 1796 ntBASIC19.96■□□□□ 0.79
ZCCHC3Q9NUD5 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.96■□□□□ 0.79
ZCCHC3Q9NUD5 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.96■□□□□ 0.79
ZCCHC3Q9NUD5 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ZCCHC3Q9NUD5 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
ZCCHC3Q9NUD5 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.96■□□□□ 0.79
ZCCHC3Q9NUD5 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.96■□□□□ 0.79
ZCCHC3Q9NUD5 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.96■□□□□ 0.79
ZCCHC3Q9NUD5 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
ZCCHC3Q9NUD5 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ZCCHC3Q9NUD5 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.96■□□□□ 0.79
ZCCHC3Q9NUD5 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
ZCCHC3Q9NUD5 RASA4CP-201ENST00000424092 1398 ntBASIC19.95■□□□□ 0.79
ZCCHC3Q9NUD5 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
ZCCHC3Q9NUD5 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.95■□□□□ 0.78
ZCCHC3Q9NUD5 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.95■□□□□ 0.78
ZCCHC3Q9NUD5 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
ZCCHC3Q9NUD5 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
ZCCHC3Q9NUD5 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
ZCCHC3Q9NUD5 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.95■□□□□ 0.78
ZCCHC3Q9NUD5 MIR939-201ENST00000401314 82 ntBASIC19.95■□□□□ 0.78
ZCCHC3Q9NUD5 AC091305.1-201ENST00000479476 895 ntBASIC19.95■□□□□ 0.78
ZCCHC3Q9NUD5 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ZCCHC3Q9NUD5 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.95■□□□□ 0.78
ZCCHC3Q9NUD5 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ZCCHC3Q9NUD5 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.95■□□□□ 0.78
ZCCHC3Q9NUD5 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.95■□□□□ 0.78
ZCCHC3Q9NUD5 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.95■□□□□ 0.78
ZCCHC3Q9NUD5 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
ZCCHC3Q9NUD5 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ZCCHC3Q9NUD5 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
ZCCHC3Q9NUD5 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
ZCCHC3Q9NUD5 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.94■□□□□ 0.78
ZCCHC3Q9NUD5 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ZCCHC3Q9NUD5 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.94■□□□□ 0.78
ZCCHC3Q9NUD5 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.94■□□□□ 0.78
ZCCHC3Q9NUD5 AC105233.4-201ENST00000642045 216 ntBASIC19.94■□□□□ 0.78
ZCCHC3Q9NUD5 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ZCCHC3Q9NUD5 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ZCCHC3Q9NUD5 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ZCCHC3Q9NUD5 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ZCCHC3Q9NUD5 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.93■□□□□ 0.78
ZCCHC3Q9NUD5 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
ZCCHC3Q9NUD5 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.93■□□□□ 0.78
ZCCHC3Q9NUD5 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ZCCHC3Q9NUD5 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ZCCHC3Q9NUD5 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ZCCHC3Q9NUD5 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ZCCHC3Q9NUD5 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.93■□□□□ 0.78
ZCCHC3Q9NUD5 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ZCCHC3Q9NUD5 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ZCCHC3Q9NUD5 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.93■□□□□ 0.78
ZCCHC3Q9NUD5 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ZCCHC3Q9NUD5 AL139246.5-201ENST00000606645 996 ntBASIC19.93■□□□□ 0.78
ZCCHC3Q9NUD5 RALB-208ENST00000631312 311 ntTSL 5 BASIC19.93■□□□□ 0.78
ZCCHC3Q9NUD5 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ZCCHC3Q9NUD5 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ZCCHC3Q9NUD5 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ZCCHC3Q9NUD5 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ZCCHC3Q9NUD5 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ZCCHC3Q9NUD5 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
ZCCHC3Q9NUD5 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ZCCHC3Q9NUD5 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ZCCHC3Q9NUD5 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.92■□□□□ 0.78
ZCCHC3Q9NUD5 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.92■□□□□ 0.78
ZCCHC3Q9NUD5 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.92■□□□□ 0.78
ZCCHC3Q9NUD5 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.92■□□□□ 0.78
ZCCHC3Q9NUD5 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
ZCCHC3Q9NUD5 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.92■□□□□ 0.78
ZCCHC3Q9NUD5 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.92■□□□□ 0.78
ZCCHC3Q9NUD5 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.92■□□□□ 0.78
ZCCHC3Q9NUD5 AL031432.3-201ENST00000607698 485 ntBASIC19.92■□□□□ 0.78
ZCCHC3Q9NUD5 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.92■□□□□ 0.78
ZCCHC3Q9NUD5 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
ZCCHC3Q9NUD5 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.92■□□□□ 0.78
ZCCHC3Q9NUD5 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ZCCHC3Q9NUD5 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ZCCHC3Q9NUD5 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ZCCHC3Q9NUD5 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ZCCHC3Q9NUD5 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ZCCHC3Q9NUD5 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ZCCHC3Q9NUD5 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ZCCHC3Q9NUD5 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
ZCCHC3Q9NUD5 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms