Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
GCM1Q9NP62 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC18.14■□□□□ 0.49
GCM1Q9NP62 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
GCM1Q9NP62 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
GCM1Q9NP62 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
GCM1Q9NP62 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
GCM1Q9NP62 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC18.13■□□□□ 0.49
GCM1Q9NP62 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
GCM1Q9NP62 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC18.13■□□□□ 0.49
GCM1Q9NP62 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
GCM1Q9NP62 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
GCM1Q9NP62 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
GCM1Q9NP62 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
GCM1Q9NP62 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
GCM1Q9NP62 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
GCM1Q9NP62 MIR5787-201ENST00000611784 55 ntBASIC18.13■□□□□ 0.49
GCM1Q9NP62 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC18.13■□□□□ 0.49
GCM1Q9NP62 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
GCM1Q9NP62 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
GCM1Q9NP62 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
GCM1Q9NP62 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC18.13■□□□□ 0.49
GCM1Q9NP62 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
GCM1Q9NP62 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
GCM1Q9NP62 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
GCM1Q9NP62 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
GCM1Q9NP62 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.12■□□□□ 0.49
GCM1Q9NP62 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
GCM1Q9NP62 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
GCM1Q9NP62 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
GCM1Q9NP62 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
GCM1Q9NP62 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
GCM1Q9NP62 AL117328.2-201ENST00000624617 1940 ntBASIC18.12■□□□□ 0.49
GCM1Q9NP62 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
GCM1Q9NP62 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
GCM1Q9NP62 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
GCM1Q9NP62 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
GCM1Q9NP62 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
GCM1Q9NP62 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
GCM1Q9NP62 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
GCM1Q9NP62 KRT18P14-201ENST00000534205 1250 ntBASIC18.12■□□□□ 0.49
GCM1Q9NP62 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC18.12■□□□□ 0.49
GCM1Q9NP62 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC18.12■□□□□ 0.49
GCM1Q9NP62 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
GCM1Q9NP62 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
GCM1Q9NP62 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
GCM1Q9NP62 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC18.12■□□□□ 0.49
GCM1Q9NP62 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
GCM1Q9NP62 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
GCM1Q9NP62 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
GCM1Q9NP62 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
GCM1Q9NP62 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
GCM1Q9NP62 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
GCM1Q9NP62 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
GCM1Q9NP62 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
GCM1Q9NP62 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC18.11■□□□□ 0.49
GCM1Q9NP62 AC034268.1-201ENST00000441047 882 ntBASIC18.11■□□□□ 0.49
GCM1Q9NP62 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
GCM1Q9NP62 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC18.11■□□□□ 0.49
GCM1Q9NP62 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC18.11■□□□□ 0.49
GCM1Q9NP62 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC18.11■□□□□ 0.49
GCM1Q9NP62 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC18.11■□□□□ 0.49
GCM1Q9NP62 CPT2-209ENST00000636935 803 ntTSL 5 BASIC18.11■□□□□ 0.49
GCM1Q9NP62 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
GCM1Q9NP62 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
GCM1Q9NP62 ECEL1P1-201ENST00000373592 1742 ntBASIC18.11■□□□□ 0.49
GCM1Q9NP62 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC18.11■□□□□ 0.49
GCM1Q9NP62 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC18.11■□□□□ 0.49
GCM1Q9NP62 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
GCM1Q9NP62 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.11■□□□□ 0.49
GCM1Q9NP62 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
GCM1Q9NP62 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
GCM1Q9NP62 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
GCM1Q9NP62 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
GCM1Q9NP62 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
GCM1Q9NP62 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
GCM1Q9NP62 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
GCM1Q9NP62 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
GCM1Q9NP62 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
GCM1Q9NP62 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
GCM1Q9NP62 DUX4L2-201ENST00000561772 1275 ntBASIC18.1■□□□□ 0.49
GCM1Q9NP62 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
GCM1Q9NP62 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC18.1■□□□□ 0.49
GCM1Q9NP62 DUX4L6-201ENST00000626483 1275 ntBASIC18.1■□□□□ 0.49
GCM1Q9NP62 DUX4L1-201ENST00000627662 1275 ntBASIC18.1■□□□□ 0.49
GCM1Q9NP62 DUX4L8-201ENST00000629013 1275 ntBASIC18.1■□□□□ 0.49
GCM1Q9NP62 DUX4L3-201ENST00000630187 1275 ntBASIC18.1■□□□□ 0.49
GCM1Q9NP62 DUX4L7-201ENST00000630678 1275 ntBASIC18.1■□□□□ 0.49
GCM1Q9NP62 DUX4L5-201ENST00000630834 1275 ntBASIC18.1■□□□□ 0.49
GCM1Q9NP62 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
GCM1Q9NP62 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
GCM1Q9NP62 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
GCM1Q9NP62 AP006587.3-201ENST00000525742 1516 ntBASIC18.09■□□□□ 0.49
GCM1Q9NP62 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
GCM1Q9NP62 AC055733.4-201ENST00000638462 1354 ntBASIC18.09■□□□□ 0.49
GCM1Q9NP62 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
GCM1Q9NP62 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
GCM1Q9NP62 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
GCM1Q9NP62 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
GCM1Q9NP62 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC18.09■□□□□ 0.49
GCM1Q9NP62 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms