Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
POLR2J3Q9H1A7 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
POLR2J3Q9H1A7 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
POLR2J3Q9H1A7 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
POLR2J3Q9H1A7 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
POLR2J3Q9H1A7 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
POLR2J3Q9H1A7 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
POLR2J3Q9H1A7 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.61■□□□□ 0.73
POLR2J3Q9H1A7 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC19.61■□□□□ 0.73
POLR2J3Q9H1A7 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
POLR2J3Q9H1A7 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
POLR2J3Q9H1A7 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
POLR2J3Q9H1A7 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
POLR2J3Q9H1A7 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
POLR2J3Q9H1A7 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC19.61■□□□□ 0.73
POLR2J3Q9H1A7 AC010525.1-201ENST00000585559 441 ntBASIC19.61■□□□□ 0.73
POLR2J3Q9H1A7 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
POLR2J3Q9H1A7 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
POLR2J3Q9H1A7 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.61■□□□□ 0.73
POLR2J3Q9H1A7 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
POLR2J3Q9H1A7 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
POLR2J3Q9H1A7 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
POLR2J3Q9H1A7 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
POLR2J3Q9H1A7 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
POLR2J3Q9H1A7 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
POLR2J3Q9H1A7 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
POLR2J3Q9H1A7 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
POLR2J3Q9H1A7 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
POLR2J3Q9H1A7 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.6■□□□□ 0.73
POLR2J3Q9H1A7 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
POLR2J3Q9H1A7 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC19.6■□□□□ 0.73
POLR2J3Q9H1A7 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19.6■□□□□ 0.73
POLR2J3Q9H1A7 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.6■□□□□ 0.73
POLR2J3Q9H1A7 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
POLR2J3Q9H1A7 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
POLR2J3Q9H1A7 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
POLR2J3Q9H1A7 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
POLR2J3Q9H1A7 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.59■□□□□ 0.73
POLR2J3Q9H1A7 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.59■□□□□ 0.73
POLR2J3Q9H1A7 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
POLR2J3Q9H1A7 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
POLR2J3Q9H1A7 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
POLR2J3Q9H1A7 AC026471.6-201ENST00000622954 1905 ntBASIC19.59■□□□□ 0.73
POLR2J3Q9H1A7 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
POLR2J3Q9H1A7 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
POLR2J3Q9H1A7 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
POLR2J3Q9H1A7 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
POLR2J3Q9H1A7 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
POLR2J3Q9H1A7 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.59■□□□□ 0.73
POLR2J3Q9H1A7 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
POLR2J3Q9H1A7 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
POLR2J3Q9H1A7 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
POLR2J3Q9H1A7 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
POLR2J3Q9H1A7 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC19.59■□□□□ 0.73
POLR2J3Q9H1A7 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
POLR2J3Q9H1A7 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
POLR2J3Q9H1A7 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
POLR2J3Q9H1A7 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
POLR2J3Q9H1A7 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
POLR2J3Q9H1A7 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC19.58■□□□□ 0.73
POLR2J3Q9H1A7 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
POLR2J3Q9H1A7 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
POLR2J3Q9H1A7 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.58■□□□□ 0.73
POLR2J3Q9H1A7 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
POLR2J3Q9H1A7 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC19.58■□□□□ 0.72
POLR2J3Q9H1A7 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
POLR2J3Q9H1A7 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC19.58■□□□□ 0.72
POLR2J3Q9H1A7 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
POLR2J3Q9H1A7 MIR4466-201ENST00000606121 54 ntBASIC19.58■□□□□ 0.72
POLR2J3Q9H1A7 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
POLR2J3Q9H1A7 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.58■□□□□ 0.72
POLR2J3Q9H1A7 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
POLR2J3Q9H1A7 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
POLR2J3Q9H1A7 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
POLR2J3Q9H1A7 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
POLR2J3Q9H1A7 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
POLR2J3Q9H1A7 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
POLR2J3Q9H1A7 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
POLR2J3Q9H1A7 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
POLR2J3Q9H1A7 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
POLR2J3Q9H1A7 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
POLR2J3Q9H1A7 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
POLR2J3Q9H1A7 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
POLR2J3Q9H1A7 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.57■□□□□ 0.72
POLR2J3Q9H1A7 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.57■□□□□ 0.72
POLR2J3Q9H1A7 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.57■□□□□ 0.72
POLR2J3Q9H1A7 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.57■□□□□ 0.72
POLR2J3Q9H1A7 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
POLR2J3Q9H1A7 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
POLR2J3Q9H1A7 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
POLR2J3Q9H1A7 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
POLR2J3Q9H1A7 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
POLR2J3Q9H1A7 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.56■□□□□ 0.72
POLR2J3Q9H1A7 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
POLR2J3Q9H1A7 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.56■□□□□ 0.72
POLR2J3Q9H1A7 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
POLR2J3Q9H1A7 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
POLR2J3Q9H1A7 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
POLR2J3Q9H1A7 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC19.56■□□□□ 0.72
POLR2J3Q9H1A7 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms