Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC18.86■□□□□ 0.61
USB1Q9BQ65 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
USB1Q9BQ65 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
USB1Q9BQ65 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC18.86■□□□□ 0.61
USB1Q9BQ65 AC233723.2-201ENST00000623798 2106 ntBASIC18.86■□□□□ 0.61
USB1Q9BQ65 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
USB1Q9BQ65 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
USB1Q9BQ65 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
USB1Q9BQ65 AC005224.4-201ENST00000583262 1652 ntBASIC18.85■□□□□ 0.61
USB1Q9BQ65 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
USB1Q9BQ65 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
USB1Q9BQ65 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
USB1Q9BQ65 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
USB1Q9BQ65 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC18.85■□□□□ 0.61
USB1Q9BQ65 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC18.85■□□□□ 0.61
USB1Q9BQ65 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC18.85■□□□□ 0.61
USB1Q9BQ65 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
USB1Q9BQ65 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
USB1Q9BQ65 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
USB1Q9BQ65 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
USB1Q9BQ65 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
USB1Q9BQ65 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
USB1Q9BQ65 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
USB1Q9BQ65 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC18.84■□□□□ 0.61
USB1Q9BQ65 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
USB1Q9BQ65 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC18.84■□□□□ 0.61
USB1Q9BQ65 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC18.84■□□□□ 0.61
USB1Q9BQ65 FXN-202ENST00000396364 980 ntTSL 5 BASIC18.84■□□□□ 0.61
USB1Q9BQ65 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
USB1Q9BQ65 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
USB1Q9BQ65 EP400NL-214ENST00000641289 2402 ntBASIC18.84■□□□□ 0.61
USB1Q9BQ65 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
USB1Q9BQ65 LINC00565-201ENST00000562710 2331 ntBASIC18.84■□□□□ 0.61
USB1Q9BQ65 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC18.84■□□□□ 0.61
USB1Q9BQ65 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
USB1Q9BQ65 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
USB1Q9BQ65 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC18.83■□□□□ 0.61
USB1Q9BQ65 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
USB1Q9BQ65 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
USB1Q9BQ65 KRT18P11-201ENST00000435214 1283 ntBASIC18.83■□□□□ 0.6
USB1Q9BQ65 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC18.83■□□□□ 0.6
USB1Q9BQ65 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC18.83■□□□□ 0.6
USB1Q9BQ65 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC18.83■□□□□ 0.6
USB1Q9BQ65 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.6
USB1Q9BQ65 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
USB1Q9BQ65 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
USB1Q9BQ65 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
USB1Q9BQ65 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
USB1Q9BQ65 GAS2L1P2-201ENST00000436355 1356 ntBASIC18.82■□□□□ 0.6
USB1Q9BQ65 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC18.82■□□□□ 0.6
USB1Q9BQ65 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
USB1Q9BQ65 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC18.82■□□□□ 0.6
USB1Q9BQ65 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC18.82■□□□□ 0.6
USB1Q9BQ65 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC18.82■□□□□ 0.6
USB1Q9BQ65 TESC-206ENST00000541210 936 ntTSL 3 BASIC18.82■□□□□ 0.6
USB1Q9BQ65 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC18.82■□□□□ 0.6
USB1Q9BQ65 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
USB1Q9BQ65 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
USB1Q9BQ65 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
USB1Q9BQ65 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
USB1Q9BQ65 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
USB1Q9BQ65 AP004607.4-201ENST00000530158 1459 ntBASIC18.82■□□□□ 0.6
USB1Q9BQ65 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
USB1Q9BQ65 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
USB1Q9BQ65 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
USB1Q9BQ65 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
USB1Q9BQ65 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
USB1Q9BQ65 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC18.81■□□□□ 0.6
USB1Q9BQ65 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC18.81■□□□□ 0.6
USB1Q9BQ65 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
USB1Q9BQ65 STK25-234ENST00000535007 2459 ntTSL 2 BASIC18.81■□□□□ 0.6
USB1Q9BQ65 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
USB1Q9BQ65 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
USB1Q9BQ65 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
USB1Q9BQ65 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC18.81■□□□□ 0.6
USB1Q9BQ65 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
USB1Q9BQ65 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
USB1Q9BQ65 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
USB1Q9BQ65 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
USB1Q9BQ65 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC18.8■□□□□ 0.6
USB1Q9BQ65 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
USB1Q9BQ65 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
USB1Q9BQ65 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC18.8■□□□□ 0.6
USB1Q9BQ65 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
USB1Q9BQ65 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
USB1Q9BQ65 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC18.8■□□□□ 0.6
USB1Q9BQ65 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
USB1Q9BQ65 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
USB1Q9BQ65 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC18.8■□□□□ 0.6
USB1Q9BQ65 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC18.8■□□□□ 0.6
USB1Q9BQ65 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.8■□□□□ 0.6
USB1Q9BQ65 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
USB1Q9BQ65 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC18.8■□□□□ 0.6
USB1Q9BQ65 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
USB1Q9BQ65 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
USB1Q9BQ65 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
USB1Q9BQ65 KRT87P-202ENST00000534226 1464 ntBASIC18.79■□□□□ 0.6
USB1Q9BQ65 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
USB1Q9BQ65 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
USB1Q9BQ65 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms