Protein–RNA interactions for Protein: Q99325

ATG40, Autophagy-related protein 40, yeastyeast

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
ATG40Q99325 YKR033CYKR033C 426 nt2.4□□□□□ -2.03
ATG40Q99325 YLR012CYLR012C 300 nt2.4□□□□□ -2.03
ATG40Q99325 YAR069CYAR069C 294 nt2.4□□□□□ -2.03
ATG40Q99325 YLR444CYLR444C 303 nt2.4□□□□□ -2.03
ATG40Q99325 RUF5-1RUF5-1 710 nt2.4□□□□□ -2.03
ATG40Q99325 RUF5-2RUF5-2 710 nt2.4□□□□□ -2.03
ATG40Q99325 PPT2YPL148C 522 nt2.4□□□□□ -2.03
ATG40Q99325 YOR296WYOR296W 3870 nt2.4□□□□□ -2.03
ATG40Q99325 SLI1YGR212W 1407 nt2.4□□□□□ -2.03
ATG40Q99325 TRE2YOR256C 2430 nt2.39□□□□□ -2.03
ATG40Q99325 ESL1YIL151C 3357 nt2.39□□□□□ -2.03
ATG40Q99325 NKP1YDR383C 717 nt2.39□□□□□ -2.03
ATG40Q99325 YHR086W-AYHR086W-A 162 nt2.39□□□□□ -2.03
ATG40Q99325 CAB2YIL083C 1098 nt2.39□□□□□ -2.03
ATG40Q99325 CPR7YJR032W 1182 nt2.39□□□□□ -2.03
ATG40Q99325 YAL069WYAL069W 315 nt2.39□□□□□ -2.03
ATG40Q99325 COQ9YLR201C 783 nt2.39□□□□□ -2.03
ATG40Q99325 YLR230WYLR230W 306 nt2.39□□□□□ -2.03
ATG40Q99325 ILV5YLR355C 1188 nt2.39□□□□□ -2.03
ATG40Q99325 RLP7YNL002C 969 nt2.39□□□□□ -2.03
ATG40Q99325 YBL094CYBL094C 333 nt2.39□□□□□ -2.03
ATG40Q99325 HUB1YNR032C-A 222 nt2.39□□□□□ -2.03
ATG40Q99325 DGA1YOR245C 1257 nt2.39□□□□□ -2.03
ATG40Q99325 PNT1YOR266W 1272 nt2.39□□□□□ -2.03
ATG40Q99325 SPS4YOR313C 1017 nt2.39□□□□□ -2.03
ATG40Q99325 YPR136CYPR136C 513 nt2.39□□□□□ -2.03
ATG40Q99325 YPL216WYPL216W 3309 nt2.39□□□□□ -2.03
ATG40Q99325 RTT10YPL183C 3042 nt2.39□□□□□ -2.03
ATG40Q99325 YCL076WYCL076W 744 nt2.38□□□□□ -2.03
ATG40Q99325 RRT13YER066W 558 nt2.38□□□□□ -2.03
ATG40Q99325 PEF1YGR058W 1008 nt2.38□□□□□ -2.03
ATG40Q99325 ATG27YJL178C 816 nt2.38□□□□□ -2.03
ATG40Q99325 PCD1YLR151C 1023 nt2.38□□□□□ -2.03
ATG40Q99325 PBA1YLR199C 831 nt2.38□□□□□ -2.03
ATG40Q99325 RAD10YML095C 633 nt2.38□□□□□ -2.03
ATG40Q99325 SEC59YMR013C 1560 nt2.38□□□□□ -2.03
ATG40Q99325 PFK27YOL136C 1194 nt2.38□□□□□ -2.03
ATG40Q99325 DBP5YOR046C 1449 nt2.38□□□□□ -2.03
ATG40Q99325 RFM1YOR279C 933 nt2.38□□□□□ -2.03
ATG40Q99325 YBR053CYBR053C 1077 nt2.38□□□□□ -2.03
ATG40Q99325 CSF1YLR087C 8877 nt2.38□□□□□ -2.03
ATG40Q99325 ABD1YBR236C 1311 nt2.38□□□□□ -2.03
ATG40Q99325 YBL005W-BYBL005W-B 5268 nt2.37□□□□□ -2.03
ATG40Q99325 MSM1YGR171C 1728 nt2.37□□□□□ -2.03
ATG40Q99325 YGR067CYGR067C 2415 nt2.37□□□□□ -2.03
ATG40Q99325 BMH2YDR099W 822 nt2.37□□□□□ -2.03
ATG40Q99325 YGL101WYGL101W 648 nt2.37□□□□□ -2.03
ATG40Q99325 YGR026WYGR026W 837 nt2.37□□□□□ -2.03
ATG40Q99325 RPL15AYLR029C 615 nt2.37□□□□□ -2.03
ATG40Q99325 YAR075WYAR075W 474 nt2.37□□□□□ -2.03
ATG40Q99325 SAM37YMR060C 984 nt2.37□□□□□ -2.03
ATG40Q99325 KIN82YCR091W 2163 nt2.36□□□□□ -2.03
ATG40Q99325 RDI1YDL135C 609 nt2.36□□□□□ -2.03
ATG40Q99325 YDR161WYDR161W 1164 nt2.36□□□□□ -2.03
ATG40Q99325 YDR193WYDR193W 399 nt2.36□□□□□ -2.03
ATG40Q99325 HMF1YER057C 390 nt2.36□□□□□ -2.03
ATG40Q99325 RIM9YMR063W 720 nt2.36□□□□□ -2.03
ATG40Q99325 RAS1YOR101W 930 nt2.36□□□□□ -2.03
ATG40Q99325 HMT1YBR034C 1047 nt2.36□□□□□ -2.03
ATG40Q99325 ARG2YJL071W 1725 nt2.36□□□□□ -2.03
ATG40Q99325 ALG8YOR067C 1734 nt2.36□□□□□ -2.03
ATG40Q99325 PST1YDR055W 1335 nt2.36□□□□□ -2.03
ATG40Q99325 SAP1YER047C 2694 nt2.35□□□□□ -2.03
ATG40Q99325 ECM21YBL101C 3354 nt2.35□□□□□ -2.03
ATG40Q99325 ERP6YGL002W 651 nt2.35□□□□□ -2.03
ATG40Q99325 DUO1YGL061C 744 nt2.35□□□□□ -2.03
ATG40Q99325 TAM41YGR046W 1158 nt2.35□□□□□ -2.03
ATG40Q99325 TDA8YAL064C-A 381 nt2.35□□□□□ -2.03
ATG40Q99325 YMR087WYMR087W 855 nt2.35□□□□□ -2.03
ATG40Q99325 RCE1YMR274C 948 nt2.35□□□□□ -2.03
ATG40Q99325 YBR089WYBR089W 600 nt2.35□□□□□ -2.03
ATG40Q99325 TIM12YBR091C 330 nt2.35□□□□□ -2.03
ATG40Q99325 MSB2YGR014W 3921 nt2.35□□□□□ -2.03
ATG40Q99325 YAT2YER024W 2772 nt2.35□□□□□ -2.03
ATG40Q99325 FRE2YKL220C 2136 nt2.35□□□□□ -2.03
ATG40Q99325 SEC15YGL233W 2733 nt2.34□□□□□ -2.03
ATG40Q99325 AEP2YMR282C 1743 nt2.34□□□□□ -2.03
ATG40Q99325 ACA1YER045C 1470 nt2.34□□□□□ -2.03
ATG40Q99325 AEP3YPL005W 1821 nt2.34□□□□□ -2.03
ATG40Q99325 TCB2YNL087W 3537 nt2.34□□□□□ -2.03
ATG40Q99325 MCM21YDR318W 1107 nt2.34□□□□□ -2.03
ATG40Q99325 YGR121W-AYGR121W-A 216 nt2.34□□□□□ -2.03
ATG40Q99325 YIL174WYIL174W 228 nt2.34□□□□□ -2.03
ATG40Q99325 YJL222W-AYJL222W-A 228 nt2.34□□□□□ -2.03
ATG40Q99325 YJR128WYJR128W 360 nt2.34□□□□□ -2.03
ATG40Q99325 PEX11YOL147C 711 nt2.34□□□□□ -2.03
ATG40Q99325 CYC2YOR037W 1101 nt2.34□□□□□ -2.03
ATG40Q99325 DBP10YDL031W 2988 nt2.34□□□□□ -2.04
ATG40Q99325 ESC1YMR219W 4977 nt2.33□□□□□ -2.04
ATG40Q99325 NUM1YDR150W 8247 nt2.33□□□□□ -2.04
ATG40Q99325 SIN4YNL236W 2925 nt2.33□□□□□ -2.04
ATG40Q99325 snR63snR63 255 nt2.33□□□□□ -2.04
ATG40Q99325 VMA8YEL051W 771 nt2.33□□□□□ -2.04
ATG40Q99325 RPS23AYGR118W 438 nt2.33□□□□□ -2.04
ATG40Q99325 CIR1YGR207C 786 nt2.33□□□□□ -2.04
ATG40Q99325 MRPL49YJL096W 486 nt2.33□□□□□ -2.04
ATG40Q99325 REX3YLR107W 1215 nt2.33□□□□□ -2.04
ATG40Q99325 ATG3YNR007C 933 nt2.33□□□□□ -2.04
ATG40Q99325 RPS23BYPR132W 438 nt2.33□□□□□ -2.04
ATG40Q99325 BCK1YJL095W 4437 nt2.33□□□□□ -2.04
Retrieved 100 of 7,029 protein–RNA pairs in 16.6 ms