Protein–RNA interactions for Protein: Q96MT3

PRICKLE1, Prickle-like protein 1, humanhuman

Predicted RBP Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE1Q96MT3 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PRICKLE1Q96MT3 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PRICKLE1Q96MT3 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC22■■□□□ 1.11
PRICKLE1Q96MT3 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC22■■□□□ 1.11
PRICKLE1Q96MT3 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC22■■□□□ 1.11
PRICKLE1Q96MT3 AL137784.2-201ENST00000607332 1000 ntBASIC22■■□□□ 1.11
PRICKLE1Q96MT3 AC092053.2-201ENST00000640557 1818 ntBASIC22■■□□□ 1.11
PRICKLE1Q96MT3 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PRICKLE1Q96MT3 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PRICKLE1Q96MT3 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PRICKLE1Q96MT3 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PRICKLE1Q96MT3 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PRICKLE1Q96MT3 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.99■■□□□ 1.11
PRICKLE1Q96MT3 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PRICKLE1Q96MT3 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.99■■□□□ 1.11
PRICKLE1Q96MT3 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
PRICKLE1Q96MT3 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.99■■□□□ 1.11
PRICKLE1Q96MT3 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
PRICKLE1Q96MT3 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
PRICKLE1Q96MT3 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC21.99■■□□□ 1.11
PRICKLE1Q96MT3 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC21.99■■□□□ 1.11
PRICKLE1Q96MT3 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC21.99■■□□□ 1.11
PRICKLE1Q96MT3 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
PRICKLE1Q96MT3 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PRICKLE1Q96MT3 GUSBP5-202ENST00000510805 1989 ntBASIC21.99■■□□□ 1.11
PRICKLE1Q96MT3 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC21.99■■□□□ 1.11
PRICKLE1Q96MT3 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PRICKLE1Q96MT3 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
PRICKLE1Q96MT3 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.98■■□□□ 1.11
PRICKLE1Q96MT3 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
PRICKLE1Q96MT3 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PRICKLE1Q96MT3 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
PRICKLE1Q96MT3 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC21.98■■□□□ 1.11
PRICKLE1Q96MT3 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
PRICKLE1Q96MT3 KRT19P1-201ENST00000405746 1186 ntBASIC21.98■■□□□ 1.11
PRICKLE1Q96MT3 AC006015.1-201ENST00000429970 570 ntBASIC21.98■■□□□ 1.11
PRICKLE1Q96MT3 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC21.98■■□□□ 1.11
PRICKLE1Q96MT3 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC21.98■■□□□ 1.11
PRICKLE1Q96MT3 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PRICKLE1Q96MT3 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.98■■□□□ 1.11
PRICKLE1Q96MT3 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PRICKLE1Q96MT3 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.98■■□□□ 1.11
PRICKLE1Q96MT3 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.98■■□□□ 1.11
PRICKLE1Q96MT3 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
PRICKLE1Q96MT3 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
PRICKLE1Q96MT3 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PRICKLE1Q96MT3 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PRICKLE1Q96MT3 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
PRICKLE1Q96MT3 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
PRICKLE1Q96MT3 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PRICKLE1Q96MT3 FXN-202ENST00000396364 980 ntTSL 5 BASIC21.97■■□□□ 1.11
PRICKLE1Q96MT3 AC004911.1-201ENST00000416316 871 ntBASIC21.97■■□□□ 1.11
PRICKLE1Q96MT3 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.97■■□□□ 1.11
PRICKLE1Q96MT3 AC137761.2-201ENST00000561729 223 ntBASIC21.97■■□□□ 1.11
PRICKLE1Q96MT3 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.97■■□□□ 1.11
PRICKLE1Q96MT3 AC145350.3-201ENST00000569033 163 ntBASIC21.97■■□□□ 1.11
PRICKLE1Q96MT3 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC21.97■■□□□ 1.11
PRICKLE1Q96MT3 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
PRICKLE1Q96MT3 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PRICKLE1Q96MT3 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
PRICKLE1Q96MT3 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PRICKLE1Q96MT3 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PRICKLE1Q96MT3 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PRICKLE1Q96MT3 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PRICKLE1Q96MT3 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PRICKLE1Q96MT3 AC026471.6-201ENST00000622954 1905 ntBASIC21.96■■□□□ 1.11
PRICKLE1Q96MT3 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.96■■□□□ 1.11
PRICKLE1Q96MT3 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC21.96■■□□□ 1.11
PRICKLE1Q96MT3 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PRICKLE1Q96MT3 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PRICKLE1Q96MT3 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC21.96■■□□□ 1.11
PRICKLE1Q96MT3 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.96■■□□□ 1.11
PRICKLE1Q96MT3 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC21.96■■□□□ 1.11
PRICKLE1Q96MT3 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.96■■□□□ 1.11
PRICKLE1Q96MT3 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PRICKLE1Q96MT3 AC242852.2-201ENST00000615738 1807 ntBASIC21.96■■□□□ 1.11
PRICKLE1Q96MT3 EP400NL-214ENST00000641289 2402 ntBASIC21.96■■□□□ 1.11
PRICKLE1Q96MT3 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
PRICKLE1Q96MT3 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.95■■□□□ 1.11
PRICKLE1Q96MT3 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
PRICKLE1Q96MT3 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PRICKLE1Q96MT3 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PRICKLE1Q96MT3 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
PRICKLE1Q96MT3 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC21.95■■□□□ 1.1
PRICKLE1Q96MT3 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PRICKLE1Q96MT3 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
PRICKLE1Q96MT3 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PRICKLE1Q96MT3 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC21.95■■□□□ 1.1
PRICKLE1Q96MT3 HSCB-202ENST00000398941 955 ntTSL 2 BASIC21.95■■□□□ 1.1
PRICKLE1Q96MT3 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PRICKLE1Q96MT3 SERP1-208ENST00000491660 830 ntTSL 2 BASIC21.95■■□□□ 1.1
PRICKLE1Q96MT3 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC21.95■■□□□ 1.1
PRICKLE1Q96MT3 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PRICKLE1Q96MT3 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC21.95■■□□□ 1.1
PRICKLE1Q96MT3 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PRICKLE1Q96MT3 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PRICKLE1Q96MT3 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PRICKLE1Q96MT3 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
PRICKLE1Q96MT3 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PRICKLE1Q96MT3 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms