Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ALMS1Q8TCU4 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
ALMS1Q8TCU4 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ALMS1Q8TCU4 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ALMS1Q8TCU4 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
ALMS1Q8TCU4 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ALMS1Q8TCU4 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC14.55□□□□□ -0.08
ALMS1Q8TCU4 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ALMS1Q8TCU4 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ALMS1Q8TCU4 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC14.55□□□□□ -0.08
ALMS1Q8TCU4 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
ALMS1Q8TCU4 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC14.55□□□□□ -0.08
ALMS1Q8TCU4 AP004607.7-201ENST00000527152 1677 ntBASIC14.55□□□□□ -0.08
ALMS1Q8TCU4 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
ALMS1Q8TCU4 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
ALMS1Q8TCU4 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ALMS1Q8TCU4 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
ALMS1Q8TCU4 PPOX-219ENST00000544598 813 ntTSL 2 BASIC14.55□□□□□ -0.08
ALMS1Q8TCU4 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ALMS1Q8TCU4 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ALMS1Q8TCU4 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ALMS1Q8TCU4 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ALMS1Q8TCU4 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
ALMS1Q8TCU4 KRT18P21-201ENST00000515767 1272 ntBASIC14.54□□□□□ -0.08
ALMS1Q8TCU4 RPPH1-201ENST00000516869 333 ntBASIC14.54□□□□□ -0.08
ALMS1Q8TCU4 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC14.54□□□□□ -0.08
ALMS1Q8TCU4 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC14.54□□□□□ -0.08
ALMS1Q8TCU4 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ALMS1Q8TCU4 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
ALMS1Q8TCU4 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC14.54□□□□□ -0.08
ALMS1Q8TCU4 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ALMS1Q8TCU4 AC138932.3-201ENST00000567634 1902 ntBASIC14.54□□□□□ -0.08
ALMS1Q8TCU4 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ALMS1Q8TCU4 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ALMS1Q8TCU4 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC14.54□□□□□ -0.08
ALMS1Q8TCU4 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC14.54□□□□□ -0.08
ALMS1Q8TCU4 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC14.54□□□□□ -0.08
ALMS1Q8TCU4 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC14.54□□□□□ -0.08
ALMS1Q8TCU4 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ALMS1Q8TCU4 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ALMS1Q8TCU4 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ALMS1Q8TCU4 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
ALMS1Q8TCU4 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ALMS1Q8TCU4 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ALMS1Q8TCU4 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ALMS1Q8TCU4 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ALMS1Q8TCU4 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ALMS1Q8TCU4 SOX15-203ENST00000570788 1093 ntBASIC14.53□□□□□ -0.08
ALMS1Q8TCU4 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC14.53□□□□□ -0.08
ALMS1Q8TCU4 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ALMS1Q8TCU4 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC14.53□□□□□ -0.08
ALMS1Q8TCU4 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ALMS1Q8TCU4 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ALMS1Q8TCU4 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC14.53□□□□□ -0.08
ALMS1Q8TCU4 FAM197Y4-202ENST00000622692 608 ntBASIC14.53□□□□□ -0.08
ALMS1Q8TCU4 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ALMS1Q8TCU4 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ALMS1Q8TCU4 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ALMS1Q8TCU4 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC14.52□□□□□ -0.08
ALMS1Q8TCU4 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC14.52□□□□□ -0.08
ALMS1Q8TCU4 AC069544.1-201ENST00000609399 999 ntBASIC14.52□□□□□ -0.08
ALMS1Q8TCU4 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
ALMS1Q8TCU4 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
ALMS1Q8TCU4 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
ALMS1Q8TCU4 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ALMS1Q8TCU4 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ALMS1Q8TCU4 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
ALMS1Q8TCU4 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC14.52□□□□□ -0.08
ALMS1Q8TCU4 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC14.52□□□□□ -0.08
ALMS1Q8TCU4 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
ALMS1Q8TCU4 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.08
ALMS1Q8TCU4 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC14.52□□□□□ -0.09
ALMS1Q8TCU4 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ALMS1Q8TCU4 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
ALMS1Q8TCU4 CD44-222ENST00000526025 1052 ntTSL 2 BASIC14.52□□□□□ -0.09
ALMS1Q8TCU4 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
ALMS1Q8TCU4 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ALMS1Q8TCU4 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC14.52□□□□□ -0.09
ALMS1Q8TCU4 AL034346.1-201ENST00000568244 1277 ntBASIC14.52□□□□□ -0.09
ALMS1Q8TCU4 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC14.52□□□□□ -0.09
ALMS1Q8TCU4 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ALMS1Q8TCU4 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC14.52□□□□□ -0.09
ALMS1Q8TCU4 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
ALMS1Q8TCU4 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC14.52□□□□□ -0.09
ALMS1Q8TCU4 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
ALMS1Q8TCU4 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
ALMS1Q8TCU4 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
ALMS1Q8TCU4 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ALMS1Q8TCU4 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ALMS1Q8TCU4 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
ALMS1Q8TCU4 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
ALMS1Q8TCU4 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
ALMS1Q8TCU4 AC012618.2-201ENST00000428058 849 ntBASIC14.51□□□□□ -0.09
ALMS1Q8TCU4 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC14.51□□□□□ -0.09
ALMS1Q8TCU4 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC14.51□□□□□ -0.09
ALMS1Q8TCU4 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
ALMS1Q8TCU4 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC14.51□□□□□ -0.09
ALMS1Q8TCU4 KLF2-202ENST00000592003 564 ntTSL 3 BASIC14.51□□□□□ -0.09
ALMS1Q8TCU4 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
ALMS1Q8TCU4 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms