Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC21.99■■□□□ 1.11
PCDH19Q8TAB3 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PCDH19Q8TAB3 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC21.99■■□□□ 1.11
PCDH19Q8TAB3 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC21.99■■□□□ 1.11
PCDH19Q8TAB3 BX005040.4-201ENST00000637145 1518 ntBASIC21.99■■□□□ 1.11
PCDH19Q8TAB3 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PCDH19Q8TAB3 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.99■■□□□ 1.11
PCDH19Q8TAB3 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PCDH19Q8TAB3 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.98■■□□□ 1.11
PCDH19Q8TAB3 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PCDH19Q8TAB3 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PCDH19Q8TAB3 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.98■■□□□ 1.11
PCDH19Q8TAB3 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.98■■□□□ 1.11
PCDH19Q8TAB3 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.98■■□□□ 1.11
PCDH19Q8TAB3 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
PCDH19Q8TAB3 RHOF-204ENST00000537265 699 ntTSL 2 BASIC21.98■■□□□ 1.11
PCDH19Q8TAB3 AC012414.1-201ENST00000556676 535 ntBASIC21.98■■□□□ 1.11
PCDH19Q8TAB3 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.98■■□□□ 1.11
PCDH19Q8TAB3 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC21.98■■□□□ 1.11
PCDH19Q8TAB3 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC21.98■■□□□ 1.11
PCDH19Q8TAB3 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC21.98■■□□□ 1.11
PCDH19Q8TAB3 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PCDH19Q8TAB3 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PCDH19Q8TAB3 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PCDH19Q8TAB3 AC055733.4-201ENST00000638462 1354 ntBASIC21.98■■□□□ 1.11
PCDH19Q8TAB3 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
PCDH19Q8TAB3 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
PCDH19Q8TAB3 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
PCDH19Q8TAB3 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
PCDH19Q8TAB3 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.97■■□□□ 1.11
PCDH19Q8TAB3 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC21.97■■□□□ 1.11
PCDH19Q8TAB3 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PCDH19Q8TAB3 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PCDH19Q8TAB3 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
PCDH19Q8TAB3 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PCDH19Q8TAB3 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
PCDH19Q8TAB3 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
PCDH19Q8TAB3 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
PCDH19Q8TAB3 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
PCDH19Q8TAB3 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC21.97■■□□□ 1.11
PCDH19Q8TAB3 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC21.97■■□□□ 1.11
PCDH19Q8TAB3 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
PCDH19Q8TAB3 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PCDH19Q8TAB3 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.97■■□□□ 1.11
PCDH19Q8TAB3 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
PCDH19Q8TAB3 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PCDH19Q8TAB3 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
PCDH19Q8TAB3 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
PCDH19Q8TAB3 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PCDH19Q8TAB3 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC21.96■■□□□ 1.11
PCDH19Q8TAB3 AC005224.4-201ENST00000583262 1652 ntBASIC21.96■■□□□ 1.11
PCDH19Q8TAB3 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC21.96■■□□□ 1.11
PCDH19Q8TAB3 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC21.96■■□□□ 1.11
PCDH19Q8TAB3 MIR5787-201ENST00000611784 55 ntBASIC21.96■■□□□ 1.11
PCDH19Q8TAB3 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
PCDH19Q8TAB3 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PCDH19Q8TAB3 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PCDH19Q8TAB3 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
PCDH19Q8TAB3 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
PCDH19Q8TAB3 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PCDH19Q8TAB3 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC21.95■■□□□ 1.1
PCDH19Q8TAB3 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PCDH19Q8TAB3 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.95■■□□□ 1.1
PCDH19Q8TAB3 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.95■■□□□ 1.1
PCDH19Q8TAB3 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PCDH19Q8TAB3 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC21.95■■□□□ 1.1
PCDH19Q8TAB3 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC21.95■■□□□ 1.1
PCDH19Q8TAB3 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC21.95■■□□□ 1.1
PCDH19Q8TAB3 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
PCDH19Q8TAB3 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC21.95■■□□□ 1.1
PCDH19Q8TAB3 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.95■■□□□ 1.1
PCDH19Q8TAB3 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.95■■□□□ 1.1
PCDH19Q8TAB3 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PCDH19Q8TAB3 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC21.94■■□□□ 1.1
PCDH19Q8TAB3 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCDH19Q8TAB3 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
PCDH19Q8TAB3 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCDH19Q8TAB3 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PCDH19Q8TAB3 MPST-204ENST00000404393 1329 ntTSL 5 BASIC21.94■■□□□ 1.1
PCDH19Q8TAB3 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PCDH19Q8TAB3 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PCDH19Q8TAB3 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
PCDH19Q8TAB3 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
PCDH19Q8TAB3 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PCDH19Q8TAB3 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21.94■■□□□ 1.1
PCDH19Q8TAB3 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCDH19Q8TAB3 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PCDH19Q8TAB3 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
PCDH19Q8TAB3 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.93■■□□□ 1.1
PCDH19Q8TAB3 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PCDH19Q8TAB3 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC21.93■■□□□ 1.1
PCDH19Q8TAB3 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC21.93■■□□□ 1.1
PCDH19Q8TAB3 AC005229.4-201ENST00000610085 2198 ntBASIC21.93■■□□□ 1.1
PCDH19Q8TAB3 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC21.93■■□□□ 1.1
PCDH19Q8TAB3 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.93■■□□□ 1.1
PCDH19Q8TAB3 FEM1AP4-201ENST00000443167 1987 ntBASIC21.92■■□□□ 1.1
PCDH19Q8TAB3 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PCDH19Q8TAB3 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.92■■□□□ 1.1
PCDH19Q8TAB3 IRS3P-201ENST00000223076 1006 ntBASIC21.92■■□□□ 1.1
PCDH19Q8TAB3 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC21.92■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms