Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SIMC1Q8NDZ2 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SIMC1Q8NDZ2 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SIMC1Q8NDZ2 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SIMC1Q8NDZ2 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20■□□□□ 0.79
SIMC1Q8NDZ2 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
SIMC1Q8NDZ2 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SIMC1Q8NDZ2 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
SIMC1Q8NDZ2 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20■□□□□ 0.79
SIMC1Q8NDZ2 AC012414.1-201ENST00000556676 535 ntBASIC20■□□□□ 0.79
SIMC1Q8NDZ2 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20■□□□□ 0.79
SIMC1Q8NDZ2 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20■□□□□ 0.79
SIMC1Q8NDZ2 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SIMC1Q8NDZ2 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SIMC1Q8NDZ2 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20■□□□□ 0.79
SIMC1Q8NDZ2 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SIMC1Q8NDZ2 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SIMC1Q8NDZ2 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SIMC1Q8NDZ2 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20■□□□□ 0.79
SIMC1Q8NDZ2 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20■□□□□ 0.79
SIMC1Q8NDZ2 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.99■□□□□ 0.79
SIMC1Q8NDZ2 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.99■□□□□ 0.79
SIMC1Q8NDZ2 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SIMC1Q8NDZ2 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SIMC1Q8NDZ2 AC092666.2-201ENST00000613287 246 ntBASIC19.99■□□□□ 0.79
SIMC1Q8NDZ2 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.99■□□□□ 0.79
SIMC1Q8NDZ2 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SIMC1Q8NDZ2 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.99■□□□□ 0.79
SIMC1Q8NDZ2 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
SIMC1Q8NDZ2 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
SIMC1Q8NDZ2 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.99■□□□□ 0.79
SIMC1Q8NDZ2 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SIMC1Q8NDZ2 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SIMC1Q8NDZ2 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
SIMC1Q8NDZ2 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.98■□□□□ 0.79
SIMC1Q8NDZ2 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SIMC1Q8NDZ2 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.98■□□□□ 0.79
SIMC1Q8NDZ2 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SIMC1Q8NDZ2 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
SIMC1Q8NDZ2 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SIMC1Q8NDZ2 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.98■□□□□ 0.79
SIMC1Q8NDZ2 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.98■□□□□ 0.79
SIMC1Q8NDZ2 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC19.98■□□□□ 0.79
SIMC1Q8NDZ2 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SIMC1Q8NDZ2 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.98■□□□□ 0.79
SIMC1Q8NDZ2 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.97■□□□□ 0.79
SIMC1Q8NDZ2 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SIMC1Q8NDZ2 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.97■□□□□ 0.79
SIMC1Q8NDZ2 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SIMC1Q8NDZ2 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.97■□□□□ 0.79
SIMC1Q8NDZ2 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SIMC1Q8NDZ2 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
SIMC1Q8NDZ2 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
SIMC1Q8NDZ2 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SIMC1Q8NDZ2 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
SIMC1Q8NDZ2 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.97■□□□□ 0.79
SIMC1Q8NDZ2 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.97■□□□□ 0.79
SIMC1Q8NDZ2 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
SIMC1Q8NDZ2 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SIMC1Q8NDZ2 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
SIMC1Q8NDZ2 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.97■□□□□ 0.79
SIMC1Q8NDZ2 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
SIMC1Q8NDZ2 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SIMC1Q8NDZ2 BX005040.4-201ENST00000637145 1518 ntBASIC19.97■□□□□ 0.79
SIMC1Q8NDZ2 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SIMC1Q8NDZ2 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SIMC1Q8NDZ2 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SIMC1Q8NDZ2 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SIMC1Q8NDZ2 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
SIMC1Q8NDZ2 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SIMC1Q8NDZ2 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
SIMC1Q8NDZ2 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.96■□□□□ 0.79
SIMC1Q8NDZ2 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.96■□□□□ 0.79
SIMC1Q8NDZ2 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.96■□□□□ 0.79
SIMC1Q8NDZ2 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SIMC1Q8NDZ2 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SIMC1Q8NDZ2 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
SIMC1Q8NDZ2 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
SIMC1Q8NDZ2 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
SIMC1Q8NDZ2 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SIMC1Q8NDZ2 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SIMC1Q8NDZ2 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
SIMC1Q8NDZ2 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SIMC1Q8NDZ2 AC003102.1-202ENST00000563394 1796 ntBASIC19.95■□□□□ 0.78
SIMC1Q8NDZ2 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SIMC1Q8NDZ2 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.95■□□□□ 0.78
SIMC1Q8NDZ2 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
SIMC1Q8NDZ2 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
SIMC1Q8NDZ2 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SIMC1Q8NDZ2 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SIMC1Q8NDZ2 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.95■□□□□ 0.78
SIMC1Q8NDZ2 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.95■□□□□ 0.78
SIMC1Q8NDZ2 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.95■□□□□ 0.78
SIMC1Q8NDZ2 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.95■□□□□ 0.78
SIMC1Q8NDZ2 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.95■□□□□ 0.78
SIMC1Q8NDZ2 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.95■□□□□ 0.78
SIMC1Q8NDZ2 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.95■□□□□ 0.78
SIMC1Q8NDZ2 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SIMC1Q8NDZ2 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
SIMC1Q8NDZ2 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms