Protein–RNA interactions for Protein: Q8N5U0

C11orf42, Uncharacterized protein C11orf42, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf42Q8N5U0 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
C11orf42Q8N5U0 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC17.65■□□□□ 0.42
C11orf42Q8N5U0 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
C11orf42Q8N5U0 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
C11orf42Q8N5U0 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC17.65■□□□□ 0.42
C11orf42Q8N5U0 AC026271.2-201ENST00000428091 497 ntBASIC17.65■□□□□ 0.42
C11orf42Q8N5U0 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC17.65■□□□□ 0.42
C11orf42Q8N5U0 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
C11orf42Q8N5U0 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC17.65■□□□□ 0.42
C11orf42Q8N5U0 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
C11orf42Q8N5U0 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC17.65■□□□□ 0.42
C11orf42Q8N5U0 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
C11orf42Q8N5U0 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
C11orf42Q8N5U0 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
C11orf42Q8N5U0 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
C11orf42Q8N5U0 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
C11orf42Q8N5U0 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
C11orf42Q8N5U0 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC17.64■□□□□ 0.41
C11orf42Q8N5U0 PXK-203ENST00000383715 1756 ntTSL 5 BASIC17.64■□□□□ 0.41
C11orf42Q8N5U0 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
C11orf42Q8N5U0 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
C11orf42Q8N5U0 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
C11orf42Q8N5U0 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
C11orf42Q8N5U0 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
C11orf42Q8N5U0 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
C11orf42Q8N5U0 AC123595.1-201ENST00000440769 1046 ntBASIC17.64■□□□□ 0.41
C11orf42Q8N5U0 YBX1P1-201ENST00000445822 960 ntBASIC17.64■□□□□ 0.41
C11orf42Q8N5U0 EP400NL-214ENST00000641289 2402 ntBASIC17.64■□□□□ 0.41
C11orf42Q8N5U0 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
C11orf42Q8N5U0 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
C11orf42Q8N5U0 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
C11orf42Q8N5U0 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
C11orf42Q8N5U0 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
C11orf42Q8N5U0 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC17.63■□□□□ 0.41
C11orf42Q8N5U0 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
C11orf42Q8N5U0 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
C11orf42Q8N5U0 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC17.63■□□□□ 0.41
C11orf42Q8N5U0 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC17.63■□□□□ 0.41
C11orf42Q8N5U0 AC097381.1-201ENST00000429019 1296 ntBASIC17.63■□□□□ 0.41
C11orf42Q8N5U0 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC17.63■□□□□ 0.41
C11orf42Q8N5U0 MIR6821-201ENST00000617625 74 ntBASIC17.63■□□□□ 0.41
C11orf42Q8N5U0 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
C11orf42Q8N5U0 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
C11orf42Q8N5U0 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
C11orf42Q8N5U0 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
C11orf42Q8N5U0 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
C11orf42Q8N5U0 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
C11orf42Q8N5U0 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC17.62■□□□□ 0.41
C11orf42Q8N5U0 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
C11orf42Q8N5U0 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
C11orf42Q8N5U0 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
C11orf42Q8N5U0 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
C11orf42Q8N5U0 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
C11orf42Q8N5U0 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
C11orf42Q8N5U0 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
C11orf42Q8N5U0 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
C11orf42Q8N5U0 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
C11orf42Q8N5U0 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
C11orf42Q8N5U0 AC009237.3-201ENST00000393279 1427 ntBASIC17.62■□□□□ 0.41
C11orf42Q8N5U0 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
C11orf42Q8N5U0 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC17.62■□□□□ 0.41
C11orf42Q8N5U0 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
C11orf42Q8N5U0 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
C11orf42Q8N5U0 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
C11orf42Q8N5U0 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC17.62■□□□□ 0.41
C11orf42Q8N5U0 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
C11orf42Q8N5U0 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC17.61■□□□□ 0.41
C11orf42Q8N5U0 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
C11orf42Q8N5U0 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
C11orf42Q8N5U0 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
C11orf42Q8N5U0 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
C11orf42Q8N5U0 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
C11orf42Q8N5U0 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
C11orf42Q8N5U0 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
C11orf42Q8N5U0 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC17.61■□□□□ 0.41
C11orf42Q8N5U0 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC17.61■□□□□ 0.41
C11orf42Q8N5U0 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC17.61■□□□□ 0.41
C11orf42Q8N5U0 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
C11orf42Q8N5U0 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
C11orf42Q8N5U0 RARRES2P6-201ENST00000567333 442 ntBASIC17.61■□□□□ 0.41
C11orf42Q8N5U0 AL034346.1-201ENST00000568244 1277 ntBASIC17.61■□□□□ 0.41
C11orf42Q8N5U0 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC17.61■□□□□ 0.41
C11orf42Q8N5U0 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC17.61■□□□□ 0.41
C11orf42Q8N5U0 RAB43-208ENST00000615093 783 ntTSL 5 BASIC17.61■□□□□ 0.41
C11orf42Q8N5U0 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
C11orf42Q8N5U0 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
C11orf42Q8N5U0 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC17.61■□□□□ 0.41
C11orf42Q8N5U0 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC17.61■□□□□ 0.41
C11orf42Q8N5U0 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
C11orf42Q8N5U0 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
C11orf42Q8N5U0 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC17.61■□□□□ 0.41
C11orf42Q8N5U0 AC005224.4-201ENST00000583262 1652 ntBASIC17.61■□□□□ 0.41
C11orf42Q8N5U0 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
C11orf42Q8N5U0 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
C11orf42Q8N5U0 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
C11orf42Q8N5U0 EFS-203ENST00000429593 2610 ntTSL 2 BASIC17.6■□□□□ 0.41
C11orf42Q8N5U0 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
C11orf42Q8N5U0 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
C11orf42Q8N5U0 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
C11orf42Q8N5U0 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms