Protein–RNA interactions for Protein: Q8N4Z0

RAB42, Putative Ras-related protein Rab-42, humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB42Q8N4Z0 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.7■□□□□ 0.9
RAB42Q8N4Z0 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.7■□□□□ 0.9
RAB42Q8N4Z0 RARRES2P6-201ENST00000567333 442 ntBASIC20.7■□□□□ 0.9
RAB42Q8N4Z0 AC104564.3-201ENST00000582367 638 ntBASIC20.7■□□□□ 0.9
RAB42Q8N4Z0 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC20.7■□□□□ 0.9
RAB42Q8N4Z0 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RAB42Q8N4Z0 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RAB42Q8N4Z0 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RAB42Q8N4Z0 AC055733.4-201ENST00000638462 1354 ntBASIC20.7■□□□□ 0.9
RAB42Q8N4Z0 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.69■□□□□ 0.9
RAB42Q8N4Z0 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAB42Q8N4Z0 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAB42Q8N4Z0 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAB42Q8N4Z0 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RAB42Q8N4Z0 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
RAB42Q8N4Z0 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.69■□□□□ 0.9
RAB42Q8N4Z0 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.69■□□□□ 0.9
RAB42Q8N4Z0 KRT18P14-201ENST00000534205 1250 ntBASIC20.69■□□□□ 0.9
RAB42Q8N4Z0 TERF1P2-201ENST00000583350 1212 ntBASIC20.69■□□□□ 0.9
RAB42Q8N4Z0 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.69■□□□□ 0.9
RAB42Q8N4Z0 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.69■□□□□ 0.9
RAB42Q8N4Z0 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RAB42Q8N4Z0 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RAB42Q8N4Z0 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RAB42Q8N4Z0 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
RAB42Q8N4Z0 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RAB42Q8N4Z0 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
RAB42Q8N4Z0 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RAB42Q8N4Z0 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
RAB42Q8N4Z0 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.68■□□□□ 0.9
RAB42Q8N4Z0 CCDC92B-201ENST00000575506 885 ntBASIC20.68■□□□□ 0.9
RAB42Q8N4Z0 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RAB42Q8N4Z0 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RAB42Q8N4Z0 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RAB42Q8N4Z0 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
RAB42Q8N4Z0 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
RAB42Q8N4Z0 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RAB42Q8N4Z0 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RAB42Q8N4Z0 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.67■□□□□ 0.9
RAB42Q8N4Z0 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
RAB42Q8N4Z0 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC20.67■□□□□ 0.9
RAB42Q8N4Z0 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RAB42Q8N4Z0 MIR935-201ENST00000401179 91 ntBASIC20.67■□□□□ 0.9
RAB42Q8N4Z0 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RAB42Q8N4Z0 AC034268.1-201ENST00000441047 882 ntBASIC20.67■□□□□ 0.9
RAB42Q8N4Z0 PLD4-205ENST00000553861 667 ntTSL 2 BASIC20.67■□□□□ 0.9
RAB42Q8N4Z0 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC20.67■□□□□ 0.9
RAB42Q8N4Z0 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
RAB42Q8N4Z0 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RAB42Q8N4Z0 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RAB42Q8N4Z0 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
RAB42Q8N4Z0 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
RAB42Q8N4Z0 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.67■□□□□ 0.9
RAB42Q8N4Z0 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
RAB42Q8N4Z0 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
RAB42Q8N4Z0 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RAB42Q8N4Z0 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RAB42Q8N4Z0 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RAB42Q8N4Z0 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RAB42Q8N4Z0 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RAB42Q8N4Z0 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RAB42Q8N4Z0 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RAB42Q8N4Z0 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.66■□□□□ 0.9
RAB42Q8N4Z0 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.66■□□□□ 0.9
RAB42Q8N4Z0 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.66■□□□□ 0.9
RAB42Q8N4Z0 MIR5787-201ENST00000611784 55 ntBASIC20.66■□□□□ 0.9
RAB42Q8N4Z0 KRT87P-202ENST00000534226 1464 ntBASIC20.66■□□□□ 0.9
RAB42Q8N4Z0 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.66■□□□□ 0.9
RAB42Q8N4Z0 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.66■□□□□ 0.9
RAB42Q8N4Z0 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RAB42Q8N4Z0 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RAB42Q8N4Z0 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RAB42Q8N4Z0 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RAB42Q8N4Z0 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
RAB42Q8N4Z0 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
RAB42Q8N4Z0 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RAB42Q8N4Z0 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
RAB42Q8N4Z0 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.65■□□□□ 0.9
RAB42Q8N4Z0 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
RAB42Q8N4Z0 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RAB42Q8N4Z0 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
RAB42Q8N4Z0 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC20.65■□□□□ 0.9
RAB42Q8N4Z0 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RAB42Q8N4Z0 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC20.65■□□□□ 0.9
RAB42Q8N4Z0 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
RAB42Q8N4Z0 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
RAB42Q8N4Z0 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
RAB42Q8N4Z0 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.64■□□□□ 0.9
RAB42Q8N4Z0 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RAB42Q8N4Z0 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RAB42Q8N4Z0 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.64■□□□□ 0.89
RAB42Q8N4Z0 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
RAB42Q8N4Z0 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RAB42Q8N4Z0 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
RAB42Q8N4Z0 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RAB42Q8N4Z0 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RAB42Q8N4Z0 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RAB42Q8N4Z0 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
RAB42Q8N4Z0 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RAB42Q8N4Z0 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms