Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
VPS13BQ7Z7G8 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
VPS13BQ7Z7G8 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
VPS13BQ7Z7G8 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
VPS13BQ7Z7G8 BAALC-201ENST00000297574 801 ntTSL 3 BASIC13.25□□□□□ -0.29
VPS13BQ7Z7G8 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
VPS13BQ7Z7G8 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC13.25□□□□□ -0.29
VPS13BQ7Z7G8 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
VPS13BQ7Z7G8 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.29
VPS13BQ7Z7G8 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
VPS13BQ7Z7G8 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
VPS13BQ7Z7G8 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
VPS13BQ7Z7G8 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
VPS13BQ7Z7G8 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC13.25□□□□□ -0.29
VPS13BQ7Z7G8 UNC93B5-201ENST00000530315 699 ntBASIC13.25□□□□□ -0.29
VPS13BQ7Z7G8 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
VPS13BQ7Z7G8 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC13.25□□□□□ -0.29
VPS13BQ7Z7G8 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC13.25□□□□□ -0.29
VPS13BQ7Z7G8 AC013268.1-206ENST00000638368 961 ntBASIC13.25□□□□□ -0.29
VPS13BQ7Z7G8 AC112229.1-201ENST00000639295 961 ntBASIC13.25□□□□□ -0.29
VPS13BQ7Z7G8 AC068587.7-201ENST00000641602 218 ntBASIC13.25□□□□□ -0.29
VPS13BQ7Z7G8 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
VPS13BQ7Z7G8 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
VPS13BQ7Z7G8 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
VPS13BQ7Z7G8 AL512625.2-201ENST00000417533 625 ntBASIC13.24□□□□□ -0.29
VPS13BQ7Z7G8 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC13.24□□□□□ -0.29
VPS13BQ7Z7G8 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
VPS13BQ7Z7G8 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
VPS13BQ7Z7G8 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
VPS13BQ7Z7G8 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC13.24□□□□□ -0.29
VPS13BQ7Z7G8 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
VPS13BQ7Z7G8 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
VPS13BQ7Z7G8 AC010141.2-201ENST00000452426 721 ntBASIC13.24□□□□□ -0.29
VPS13BQ7Z7G8 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC13.24□□□□□ -0.29
VPS13BQ7Z7G8 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC13.24□□□□□ -0.29
VPS13BQ7Z7G8 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
VPS13BQ7Z7G8 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
VPS13BQ7Z7G8 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
VPS13BQ7Z7G8 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
VPS13BQ7Z7G8 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC13.24□□□□□ -0.29
VPS13BQ7Z7G8 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC13.24□□□□□ -0.29
VPS13BQ7Z7G8 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC13.24□□□□□ -0.29
VPS13BQ7Z7G8 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
VPS13BQ7Z7G8 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
VPS13BQ7Z7G8 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
VPS13BQ7Z7G8 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
VPS13BQ7Z7G8 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
VPS13BQ7Z7G8 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
VPS13BQ7Z7G8 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
VPS13BQ7Z7G8 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
VPS13BQ7Z7G8 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC13.23□□□□□ -0.29
VPS13BQ7Z7G8 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
VPS13BQ7Z7G8 LINC00526-201ENST00000581067 1875 ntBASIC13.23□□□□□ -0.29
VPS13BQ7Z7G8 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
VPS13BQ7Z7G8 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC13.23□□□□□ -0.29
VPS13BQ7Z7G8 BX276092.2-201ENST00000417668 665 ntBASIC13.23□□□□□ -0.29
VPS13BQ7Z7G8 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC13.23□□□□□ -0.29
VPS13BQ7Z7G8 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC13.23□□□□□ -0.29
VPS13BQ7Z7G8 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
VPS13BQ7Z7G8 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
VPS13BQ7Z7G8 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
VPS13BQ7Z7G8 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
VPS13BQ7Z7G8 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
VPS13BQ7Z7G8 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
VPS13BQ7Z7G8 RCN1P1-201ENST00000400413 996 ntBASIC13.23□□□□□ -0.29
VPS13BQ7Z7G8 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
VPS13BQ7Z7G8 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC13.23□□□□□ -0.29
VPS13BQ7Z7G8 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC13.23□□□□□ -0.29
VPS13BQ7Z7G8 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
VPS13BQ7Z7G8 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
VPS13BQ7Z7G8 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
VPS13BQ7Z7G8 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
VPS13BQ7Z7G8 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
VPS13BQ7Z7G8 KRT18P20-201ENST00000548986 1279 ntBASIC13.23□□□□□ -0.29
VPS13BQ7Z7G8 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
VPS13BQ7Z7G8 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
VPS13BQ7Z7G8 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
VPS13BQ7Z7G8 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC13.22□□□□□ -0.29
VPS13BQ7Z7G8 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
VPS13BQ7Z7G8 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
VPS13BQ7Z7G8 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
VPS13BQ7Z7G8 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
VPS13BQ7Z7G8 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC13.22□□□□□ -0.29
VPS13BQ7Z7G8 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
VPS13BQ7Z7G8 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
VPS13BQ7Z7G8 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC13.22□□□□□ -0.29
VPS13BQ7Z7G8 GXYLT1P3-201ENST00000453058 1193 ntBASIC13.22□□□□□ -0.29
VPS13BQ7Z7G8 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC13.22□□□□□ -0.29
VPS13BQ7Z7G8 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
VPS13BQ7Z7G8 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
VPS13BQ7Z7G8 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
VPS13BQ7Z7G8 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC13.22□□□□□ -0.29
VPS13BQ7Z7G8 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
VPS13BQ7Z7G8 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
VPS13BQ7Z7G8 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
VPS13BQ7Z7G8 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC13.22□□□□□ -0.29
VPS13BQ7Z7G8 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
VPS13BQ7Z7G8 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC13.22□□□□□ -0.29
VPS13BQ7Z7G8 AC073912.3-201ENST00000624414 853 ntBASIC13.22□□□□□ -0.29
VPS13BQ7Z7G8 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC13.21□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 369 ms