Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC13.96□□□□□ -0.17
SCXQ7RTU7 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC13.96□□□□□ -0.17
SCXQ7RTU7 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC13.96□□□□□ -0.17
SCXQ7RTU7 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC13.96□□□□□ -0.17
SCXQ7RTU7 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
SCXQ7RTU7 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SCXQ7RTU7 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SCXQ7RTU7 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
SCXQ7RTU7 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC13.96□□□□□ -0.18
SCXQ7RTU7 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
SCXQ7RTU7 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC13.96□□□□□ -0.18
SCXQ7RTU7 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SCXQ7RTU7 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SCXQ7RTU7 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC13.96□□□□□ -0.18
SCXQ7RTU7 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SCXQ7RTU7 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
SCXQ7RTU7 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
SCXQ7RTU7 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SCXQ7RTU7 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SCXQ7RTU7 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SCXQ7RTU7 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SCXQ7RTU7 AC004687.1-201ENST00000579003 1625 ntBASIC13.95□□□□□ -0.18
SCXQ7RTU7 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SCXQ7RTU7 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
SCXQ7RTU7 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC13.95□□□□□ -0.18
SCXQ7RTU7 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SCXQ7RTU7 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC13.95□□□□□ -0.18
SCXQ7RTU7 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC13.95□□□□□ -0.18
SCXQ7RTU7 TERF1P2-201ENST00000583350 1212 ntBASIC13.95□□□□□ -0.18
SCXQ7RTU7 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC13.95□□□□□ -0.18
SCXQ7RTU7 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC13.95□□□□□ -0.18
SCXQ7RTU7 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SCXQ7RTU7 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SCXQ7RTU7 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC13.95□□□□□ -0.18
SCXQ7RTU7 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SCXQ7RTU7 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC13.95□□□□□ -0.18
SCXQ7RTU7 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SCXQ7RTU7 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
SCXQ7RTU7 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SCXQ7RTU7 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
SCXQ7RTU7 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
SCXQ7RTU7 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SCXQ7RTU7 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SCXQ7RTU7 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SCXQ7RTU7 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SCXQ7RTU7 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC13.94□□□□□ -0.18
SCXQ7RTU7 AC137767.1-201ENST00000602918 1920 ntBASIC13.94□□□□□ -0.18
SCXQ7RTU7 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC13.94□□□□□ -0.18
SCXQ7RTU7 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC13.94□□□□□ -0.18
SCXQ7RTU7 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SCXQ7RTU7 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
SCXQ7RTU7 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
SCXQ7RTU7 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
SCXQ7RTU7 MFF-208ENST00000409616 1247 ntTSL 5 BASIC13.94□□□□□ -0.18
SCXQ7RTU7 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
SCXQ7RTU7 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC13.94□□□□□ -0.18
SCXQ7RTU7 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
SCXQ7RTU7 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SCXQ7RTU7 AC090192.1-201ENST00000517740 490 ntBASIC13.94□□□□□ -0.18
SCXQ7RTU7 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC13.94□□□□□ -0.18
SCXQ7RTU7 LINC00526-201ENST00000581067 1875 ntBASIC13.94□□□□□ -0.18
SCXQ7RTU7 RNF165-205ENST00000588679 2904 ntBASIC13.94□□□□□ -0.18
SCXQ7RTU7 NTF6G-201ENST00000591094 616 ntBASIC13.94□□□□□ -0.18
SCXQ7RTU7 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC13.94□□□□□ -0.18
SCXQ7RTU7 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
SCXQ7RTU7 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC13.94□□□□□ -0.18
SCXQ7RTU7 RARRES2P11-201ENST00000635158 484 ntBASIC13.94□□□□□ -0.18
SCXQ7RTU7 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SCXQ7RTU7 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SCXQ7RTU7 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SCXQ7RTU7 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC13.94□□□□□ -0.18
SCXQ7RTU7 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
SCXQ7RTU7 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SCXQ7RTU7 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SCXQ7RTU7 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SCXQ7RTU7 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC13.93□□□□□ -0.18
SCXQ7RTU7 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SCXQ7RTU7 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SCXQ7RTU7 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC13.93□□□□□ -0.18
SCXQ7RTU7 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SCXQ7RTU7 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SCXQ7RTU7 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC13.93□□□□□ -0.18
SCXQ7RTU7 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC13.93□□□□□ -0.18
SCXQ7RTU7 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC13.93□□□□□ -0.18
SCXQ7RTU7 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC13.93□□□□□ -0.18
SCXQ7RTU7 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
SCXQ7RTU7 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
SCXQ7RTU7 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
SCXQ7RTU7 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC13.93□□□□□ -0.18
SCXQ7RTU7 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC13.93□□□□□ -0.18
SCXQ7RTU7 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SCXQ7RTU7 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC13.93□□□□□ -0.18
SCXQ7RTU7 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC13.93□□□□□ -0.18
SCXQ7RTU7 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC13.93□□□□□ -0.18
SCXQ7RTU7 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SCXQ7RTU7 AC092437.1-201ENST00000624794 1048 ntBASIC13.93□□□□□ -0.18
SCXQ7RTU7 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC13.93□□□□□ -0.18
SCXQ7RTU7 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
SCXQ7RTU7 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SCXQ7RTU7 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms